Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 270 a.a., flagellin domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  414 bits (1064), Expect = e-120
 Identities = 229/272 (84%), Positives = 245/272 (90%), Gaps = 2/272 (0%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           MAITVNTNVTSLKAQKNLNTSAS LATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
Sbjct: 1   MAITVNTNVTSLKAQKNLNTSASGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           LEVGMRNANDAISIAQI+EGAMQEQTNMLQRMRDLTVQSENGANS+ DL A++ E+DQLA
Sbjct: 61  LEVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTVQSENGANSTDDLDAIQKEIDQLA 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNTTS 180
            EI EIG  TAFG+TKLL G FS GK FQVG Q GEDI ++V  +  S+L V SL + T 
Sbjct: 121 LEITEIGDNTAFGSTKLLDGTFS-GKTFQVGHQSGEDITISVAKTTASALKVDSL-DITG 178

Query: 181 AARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE 240
           +ARAS+L  IDAAIKTID+QRADLGA QNRLA+NISNSANTQAN+ADAKSRIVDVDFAKE
Sbjct: 179 SARASALAAIDAAIKTIDSQRADLGAKQNRLAYNISNSANTQANIADAKSRIVDVDFAKE 238

Query: 241 TSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           TSQMTKNQVLQQTGSAMLAQANQLPQVALSLL
Sbjct: 239 TSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 270