Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 273 a.a., flagellin domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  404 bits (1039), Expect = e-118
 Identities = 217/272 (79%), Positives = 241/272 (88%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           MAITVNTNVTS+KAQKNLNTS+S LATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
Sbjct: 1   MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           L+VGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQ+ENGANS+ DL A++ E++QL+
Sbjct: 61  LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLS 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNTTS 180
            EI  IG +TAFG T L+ G FS GK FQVG Q+GEDI ++V  +N  SLSV +L   ++
Sbjct: 121 EEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASA 180

Query: 181 AARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE 240
             R+++L  IDAAIKTID QRA+LGA QNRLA+NISNSANTQANVADAKSRIVDVDFAKE
Sbjct: 181 GGRSTALANIDAAIKTIDNQRANLGAKQNRLAYNISNSANTQANVADAKSRIVDVDFAKE 240

Query: 241 TSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           TS MTKNQVLQQTGSAMLAQANQLPQVALSLL
Sbjct: 241 TSVMTKNQVLQQTGSAMLAQANQLPQVALSLL 272