Pairwise Alignments

Query, 446 a.a., flagellar regulatory protein C (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 446 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  835 bits (2157), Expect = 0.0
 Identities = 427/446 (95%), Positives = 439/446 (98%)

Query: 1   MSEAKLLLVEDDASLREALLDTLMLAQYDCIDVASGEEAILALKQHQFDLVISDVQMPGI 60
           MSEAKLLLVEDDASLREALLDTLMLAQYDCIDVASGEEAI+ LKQHQFDLVISDVQM GI
Sbjct: 1   MSEAKLLLVEDDASLREALLDTLMLAQYDCIDVASGEEAIIVLKQHQFDLVISDVQMQGI 60

Query: 61  GGLGLLNYLQQHHPKLPVLLMTAYATIGSAVSAIKLGAVDYLAKPFAPEVLLNQVSRYLP 120
           GGLGLLNYLQQHHPKLPVLLMTAYATIGSAVSAIKLGAVDYLAKPFAPEVLLNQVSRYLP
Sbjct: 61  GGLGLLNYLQQHHPKLPVLLMTAYATIGSAVSAIKLGAVDYLAKPFAPEVLLNQVSRYLP 120

Query: 121 LKQNRDQPVVADEKSLSLLSLAQRVAASDASVMILGPSGSGKEVLARYIHQHSSRAEEAF 180
           LKQN DQPVVADEKSL+LLSLAQRVAASDASVMILGPSGSGKEVLARYIHQHSSRA+EAF
Sbjct: 121 LKQNSDQPVVADEKSLALLSLAQRVAASDASVMILGPSGSGKEVLARYIHQHSSRADEAF 180

Query: 181 VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL 240
           VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL
Sbjct: 181 VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL 240

Query: 241 LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAVVAAGQFREDLYYRINVFPLTWPALN 300
           LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAVVAAGQFREDLYYRINVFPLTWPALN
Sbjct: 241 LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAVVAAGQFREDLYYRINVFPLTWPALN 300

Query: 301 QRPADILPLARHLLTKHAKALNVVDLPEFDDAACRRLLSHRWPGNVRELDNVVQRALILR 360
           QRPADILPLARHLLTKHAKAL+++D+PEFD+AACRRLL HRWPGNVRELDNVVQRALILR
Sbjct: 301 QRPADILPLARHLLTKHAKALSIIDVPEFDEAACRRLLGHRWPGNVRELDNVVQRALILR 360

Query: 361 AGALITANDIIIDAQDVPLTSDDAEYMSEPEGLGEELKAQEHVIILETLVQCQGSRKLVA 420
           +G +ITANDIIIDAQDVPL+SDDAEY SEPEGLGEELKAQEHVIILETL QCQGSRKLVA
Sbjct: 361 SGTVITANDIIIDAQDVPLSSDDAEYCSEPEGLGEELKAQEHVIILETLAQCQGSRKLVA 420

Query: 421 EKLGISARTLRYKMARMRDMGIQLPS 446
           EKLGISARTLRYKMARMRDMGIQLP+
Sbjct: 421 EKLGISARTLRYKMARMRDMGIQLPN 446