Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 557 a.a., flagellar MS-ring protein from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 4e-39
 Identities = 122/553 (22%), Positives = 250/553 (45%), Gaps = 28/553 (5%)

Query: 16  NLGGVDMMRQITMILALAICLALAVFVMIWAQEPEYRPLGK-METQEMVQVLDVLDKNKI 74
           NL  +   + I + +A  + +   +   I+   P +  L   +E  ++ Q+   L +  +
Sbjct: 13  NLSNLGQGKLIALAVAGVVAIGFVLGAGIYVNRPSFETLYVGLERSDVTQISIALAEANV 72

Query: 75  KYQIDVD--VVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGVSQRMEQARLKH 132
            +++  D   ++VP     + +++L+  G+ S+A +  +        G++  M++     
Sbjct: 73  DFEVGTDGGSIQVPVGMTGKARLLLAERGLPSSANAGYELFDNVGSLGLTSFMQEVTRVR 132

Query: 133 SQEENLARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRGGLGQGEVDAIV 192
           + E  +AR I+Q+  ++ A+V + +P+   F +    P+A+V+I      +G+    +I 
Sbjct: 133 ALEGEIARTIQQISGIAAARVHIVMPERGSFRKAEQTPTASVMIRA-SATVGRSAASSIR 191

Query: 193 DIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGVSARARRELELVQQKETEYRTKIDSILS 252
            +VAS+V GL+   VTV DS G+LL SG     SA   + L +VQ  +++   KID+ L+
Sbjct: 192 HLVASSVPGLDVDDVTVLDSTGQLLASGDDPSNSA-LNQSLGVVQNVQSDLEKKIDNALA 250

Query: 253 PILGHDNFTSQVDVSMDFTAVEQTAKRFNPDLPSLRSEMTVENNSTGGSTGGIPGALSNQ 312
           P LG DNF + V   ++  A +     F+P+    RS   ++                N 
Sbjct: 251 PFLGMDNFRTSVTARLNTDAQQIQETVFDPESRVERSTRVIKEEQKSSQQ-----QPDNA 305

Query: 313 PPMESNIPQEAATAATESVAAGNSH-REATRNFELDTTISHTRQQIGVVRRVSVSVAVDF 371
             ++ N+PQ A        ++  +  +E   N+E+++    T +    + R+S++V V+ 
Sbjct: 306 ATVQQNVPQAAPRGGAGQQSSDEAEKKEEQTNYEINSKTIATVKNSYSIERLSIAVVVN- 364

Query: 372 KPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFMDQLVED--VP 429
           +   A   G+ A  A+ +  L  +++++  A G    RGDV+ +  + F++  + D  VP
Sbjct: 365 RGRLAAMAGEPADQAKIDAYLQEMQKIVSSAAGIDPGRGDVVTLNAMDFVETQLLDQAVP 424

Query: 430 APELWEQPWFWRAVKLGVGALVILVLILAVV----RPMLKRLIYPDRVNMPEDGRLGNEL 485
            P + E     R +   + AL  + +   VV    RP+ ++L +  +    E    G EL
Sbjct: 425 GPGIMEM--LTRNLGGIINALAFVAVAFLVVWFGMRPLARQLGFGGQAGKLEGEAAGLEL 482

Query: 486 AEIEDQYAADTLGMLNTKEAEYSYADDGSILIP-------NLHKDDDMIKAIRALVANEP 538
            +     A     ++    +++ + D G  L+        N    +   + +  +V    
Sbjct: 483 PDFSPAGAGAGGALMEGFGSDFGF-DGGDDLLNLGDEAGFNRRVKEGPERRLARMVEISE 541

Query: 539 ELSTQVVKNWLQD 551
           E + ++++ W  D
Sbjct: 542 ERAAKILRKWAVD 554