Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 565 a.a., flagellar MS-ring protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  870 bits (2248), Expect = 0.0
 Identities = 438/551 (79%), Positives = 497/551 (90%), Gaps = 1/551 (0%)

Query: 4   GVQQEHKSGVLGNLGGVDMMRQITMILALAICLALAVFVMIWAQEPEYRPLGKMETQEMV 63
           GVQQE+KSGVLGNLG  DM+RQ+TMILALAICLALAVFVM+WAQEPEYRPLGK E QEM+
Sbjct: 15  GVQQENKSGVLGNLGSADMLRQVTMILALAICLALAVFVMMWAQEPEYRPLGKFEAQEMI 74

Query: 64  QVLDVLDKNKIKYQIDVDVVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGVSQ 123
           QVLDVLDKNKI YQ+D DV++VPEDKYQ+++++LSR G+D+A+T+ QDFL+QD GFGVSQ
Sbjct: 75  QVLDVLDKNKIPYQVDFDVLRVPEDKYQDIRLLLSRNGVDAASTTNQDFLSQDMGFGVSQ 134

Query: 124 RMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRGGL 183
           R+EQARLKHSQE+NLAR IE+L+SVSRAKVILALPKENVFARN ++ SATVV+ +RRGGL
Sbjct: 135 RLEQARLKHSQEQNLARTIEELKSVSRAKVILALPKENVFARNQSKASATVVVTSRRGGL 194

Query: 184 GQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGVSARARRELELVQQKETEY 243
           GQ EVDAIVDIVASAVQGLEP+RVTVTDSNGRLLNSGSQDG SARARRELELV+QKE EY
Sbjct: 195 GQEEVDAIVDIVASAVQGLEPTRVTVTDSNGRLLNSGSQDGASARARRELELVKQKEAEY 254

Query: 244 RTKIDSILSPILGHDNFTSQVDVSMDFTAVEQTAKRFNPDLPSLRSEMTVENNSTGGSTG 303
           R K+D+IL PILG +N+TSQVDV+MDFTAVEQT+KRFNPDLP++RSEMT+E  ++G +  
Sbjct: 255 RAKVDAILMPILGPENYTSQVDVTMDFTAVEQTSKRFNPDLPAVRSEMTLETQTSGEANM 314

Query: 304 GIPGALSNQPPMESNIPQEAATAATESVAAGNSHREATRNFELDTTISHTRQQIGVVRRV 363
           GIPGALSNQPPMESNIPQ    A  ++ A GNSHREATRN+ELDTTISHTRQQIGVVRRV
Sbjct: 315 GIPGALSNQPPMESNIPQTLQEAQDKAQANGNSHREATRNYELDTTISHTRQQIGVVRRV 374

Query: 364 SVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFMDQ 423
           SVSVAVD+K G A   GQV RVARTE EL NIRRLLEGAVGFS QRGD +EVVTVPFMDQ
Sbjct: 375 SVSVAVDYKTGEANTEGQVNRVARTEAELANIRRLLEGAVGFSGQRGDSIEVVTVPFMDQ 434

Query: 424 LVEDVPAPELWEQPWFWRAVKLGVGALVILVLILAVVRPMLKRLIYPDRVNMPEDGRLGN 483
           LVE+VP   +WEQPWFW+A+KL  G+L ILVLIL VVRP+LK+L+  D+V+MP+DGRLG+
Sbjct: 435 LVEEVPELPMWEQPWFWKAMKLASGSLAILVLILFVVRPLLKKLLLTDKVDMPDDGRLGH 494

Query: 484 ELAEIEDQYAADTLGMLNTKEAEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELSTQ 543
           ELAEIEDQ+AADTLGMLN  +AEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELSTQ
Sbjct: 495 ELAEIEDQFAADTLGMLNASDAEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELSTQ 554

Query: 544 VVKNWL-QDNG 553
           VVKNWL QDNG
Sbjct: 555 VVKNWLQQDNG 565