Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 583 a.a., flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF from Dechlorosoma suillum PS

 Score =  219 bits (557), Expect = 3e-61
 Identities = 169/557 (30%), Positives = 286/557 (51%), Gaps = 57/557 (10%)

Query: 17  LGGVDMMRQITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMVQVLDVLDKNKIK 75
           LG +   ++I +++A+A   AL +  ++W+++P+Y+ L   +  ++   ++  L++  + 
Sbjct: 27  LGRLTNQQKIALMVAVAAIAALIMGTILWSRQPDYKVLFSNLSEKDGGTIITALEQLNVP 86

Query: 76  YQIDVD--VVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGVSQRMEQARLKHS 133
           Y+       + VP +K  EV++ L+  G+        + L ++  FG+SQ  EQ   + +
Sbjct: 87  YKFTEGGGAILVPGEKVHEVRLRLASQGLPKGGAVGFE-LMENQKFGISQFAEQVNFQRA 145

Query: 134 QEENLARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRGG-LGQGEVDAIV 192
            E  L R I+ + +V  A+V LA+PK +VF R   +P+A+V+++   G  L   +V  IV
Sbjct: 146 LEGELGRTIQSVAAVESARVHLAIPKPSVFVREEQKPTASVMVHLHPGRTLEPAQVAGIV 205

Query: 193 DIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGVSARAR-RELELVQQKETEYRTKIDSIL 251
            +V+S+V  L  S VTV D NG L++      + A     +++ VQ+ E     +ID IL
Sbjct: 206 HLVSSSVPQLPMSNVTVIDQNGNLISQLKSKLIEAGLDPTQIKYVQEVEASVIKRIDDIL 265

Query: 252 SPILGHDNFTSQVDVSMDFTAVEQTAKRFNPDLP----SLRSEMTVENNSTGGSTGGIPG 307
           +P++G  N   QV   +DF+  EQTA+ + P+      S+RS+ T E  +      G+PG
Sbjct: 266 APVVGPGNARVQVAADIDFSQTEQTAESYRPNTTPPDISIRSQQTSETANVNPPAQGVPG 325

Query: 308 ALSNQPPMESNIPQEA------ATAATESV-----------AAG------------NSHR 338
           AL+NQPP+ +  P  +      ATA T +            AAG            N+ +
Sbjct: 326 ALTNQPPVPATAPITSPPVAGQATAQTGATNGQPPPPGQINAAGVQAPIYSAGQPINTRK 385

Query: 339 EATRNFELDTTISHTRQQIGVVRRVSVSVAVDFKPGAAGENGQVARVARTEQELTNIRRL 398
           ++T N+E+D TI + +Q +GV++R+SV+V V+ K     ++G+      TE EL  I  L
Sbjct: 386 DSTINYEVDKTIKYVKQSVGVIKRLSVAVVVNNKKDTT-KDGKPTTRPLTEAELKQINDL 444

Query: 399 LEGAVGFSAQRGDVLEVVTVPFMDQLVEDVPAPELWEQ---PWFWRAV--KLGVGALVIL 453
              A+G++ +RGD L V    F     ED   P LW+Q   P   + +   L +GA+V  
Sbjct: 445 AREAMGYAKERGDTLSVANAAFTAVEKED-NEPPLWKQLATPEMGKDLLKYLLIGAIVAY 503

Query: 454 VLILAVVRPMLKRLIYPDRVNM-PEDGRLGNELAEIE------DQYAADTLGMLNTKEAE 506
           +L LAVVRP+L+ +  P    +  E+G  G E  E++      D   A   G +  K  E
Sbjct: 504 IL-LAVVRPILRTMFPPPSPEVEEEEGEEGEEDVEVDLTAMGGDLILATYEGKMQ-KARE 561

Query: 507 YSYADDGSILIPNLHKD 523
            ++AD  +  + N+ KD
Sbjct: 562 IAHADPKA--VANIIKD 576