Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 558 a.a., flagellar M-ring protein FliF (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  126 bits (316), Expect = 3e-33
 Identities = 126/559 (22%), Positives = 240/559 (42%), Gaps = 41/559 (7%)

Query: 19  GVDMMRQITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMVQVLDVLDKNKIKYQ 77
           G+ +  Q+  I A+       + +   A  P+Y  L   +E     +V+  L++  I +Q
Sbjct: 12  GLGLRNQLIAIAAVLGVFGALLALSRTALAPDYALLYSGLEPAAAGEVIANLEQRGIAHQ 71

Query: 78  IDVDVVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGVSQRMEQARLKHSQEEN 137
           +    + V   +   +++ L+  G+ +A  +  + L   SGFG + +M  A    ++E  
Sbjct: 72  VRGTGIYVDRAQQDRLRIALAAEGLPAAGGAGYELLDSLSGFGTTSQMFDAAYWRAKEGE 131

Query: 138 LARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRGGLGQGEVDAIVDIVAS 197
           LAR I    SV  A+V ++      F     +P+A+V +   RG L  G+ DA+  +V+S
Sbjct: 132 LARTIASSASVRSARVHVSAASSRPFEARK-EPTASVFLTPARGSLSGGQADALRYLVSS 190

Query: 198 AVQGLEPSRVTVTDSNGRLLNSGSQDGVSARARRELELVQQKETEYRTKIDSILSPILGH 257
           A+ G+ P  V++ D+    + +G +   SA A +       K    + +I+ +L   +G 
Sbjct: 191 AIAGMRPENVSIIDAVSGTMLTG-EGPASAIAEQ-----TTKADALKLRIERLLEARVGV 244

Query: 258 DNFTSQVDVSMDFTAVEQTAKRFNPDLPSLRSEMTVENNSTGGSTGGIPGALSNQPPMES 317
            N   +V++  +        + F+P+     S  T E  ST  S+    G++S    + S
Sbjct: 245 GNAFVEVNIETERDRERIVERVFDPNGTVPVSRETTE--STLQSSRDSEGSVS----VAS 298

Query: 318 NIPQEAATAATESVAAGNSHREATRNFELDTTISHTRQQIGVVRRVSVSVAVDFKPGAAG 377
           N+P   A A +   A   +      N+E+  T     +  G  +R++V+V V+  P +  
Sbjct: 299 NLPDGDANAESAKDAQNETETRERINYEVSETQREIERGPGATKRLTVAVLVNGIP-SVS 357

Query: 378 ENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFMDQLVEDVPAPELWEQP 437
           E+G V+   R ++E+ ++  L++  VGF   RGDV+ + ++        D      W  P
Sbjct: 358 EDGTVSFTPRPDREMADLEELVKSTVGFDETRGDVITLRSMEMPGSAAPDPVESSGWFAP 417

Query: 438 W---FWRAVKLGVGALVILVLILAVVRPMLKRLIYPDRVNMP---------------EDG 479
                   +++   ALV L L L V+RP+LK    P +  +P                 G
Sbjct: 418 QPVDTMSVIQIAALALVTLFLGLFVLRPILKSA--PAQAQLPAAETAGLPAPAGSATRAG 475

Query: 480 RLGNELAEIEDQYAADTLGMLNTKEAEYSYADDGSIL------IPNLHKDDDMIKAIRAL 533
             G+ L     Q A         +      + D S +      + +  ++ D +  +R L
Sbjct: 476 ETGSNLVARLQQSAGTAAKEATPEVLSGEISTDASDVAAAARTLTSQDEERDPVTRLRQL 535

Query: 534 VANEPELSTQVVKNWLQDN 552
           +      + +++ +W+ +N
Sbjct: 536 IKERETETIEILSSWINEN 554