Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 611 a.a., flagellar basal-body MS-ring/collar protein FliF from Ralstonia sp. UNC404CL21Col

 Score =  230 bits (586), Expect = 1e-64
 Identities = 177/594 (29%), Positives = 290/594 (48%), Gaps = 52/594 (8%)

Query: 3   QGVQQEHKSGVLGNLGGVDMMRQIT----MILALAICLALAVFVMIWAQEPEYRPL-GKM 57
           QG      +G  G LG +  + +++    M++  A  +A+    M+W++ P+YR L   +
Sbjct: 24  QGAMTRQNAGGAGALGALGPLGRLSPRLLMMIGGAALVAVIAAAMLWSRGPDYRVLYSNV 83

Query: 58  ETQEMVQVLDVLDKNKIKYQIDVD--VVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQ 115
              +   ++  L +  + Y+       + VPE    E ++ L+  G+     +  + L +
Sbjct: 84  SDSDGGAIIAALQQMNVPYRFAEGGTAIMVPETSVHEARLKLASQGLPKGGQAGFE-LME 142

Query: 116 DSGFGVSQRMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVV 175
           +  FG SQ  EQ   + + E  LAR I+ +Q V  A+V LA+ K +VF R  A+PSA+V+
Sbjct: 143 NQKFGTSQFTEQVNYQRALEGELARTIQAMQEVQSARVHLAMTKPSVFVREQAKPSASVL 202

Query: 176 INTRRGG-LGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGVSARARRELE 234
           +    G  L + +V AI  +V+S+V  L  + VTV D +GRLL+S  QD  S     +L 
Sbjct: 203 LKLYPGRMLDRSQVQAIGHLVSSSVPNLPLANVTVVDQSGRLLSSSFQDNASGLDPTQLS 262

Query: 235 LVQQKETEYRTKIDSILSPILGHDNFTSQVDVSMDFTAVEQTAKRFNPDL----PSLRSE 290
            V+  E  Y  +I++IL P++G DN  +QV   +D    EQ A+ + P+      ++RS 
Sbjct: 263 YVRDVEQGYIKRIEAILGPVVGEDNVRAQVTADVDLDNTEQMAETYRPNQDPANAAVRST 322

Query: 291 MTVE-NNSTGGSTGGIPGALSNQPPMESNI---------------------PQEAATAAT 328
            T E   +   + GG+PGALSNQPP    +                     PQ+AA A T
Sbjct: 323 HTAEATQNKADAQGGVPGALSNQPPTAPRMLPTAPAPASASQPAATGPNGQPQQAAAANT 382

Query: 329 ESVAA-GNSH--REATRNFELDTTISHTRQQIGVVRRVSVSVAVDFKPGAAGENGQVARV 385
              A  GNS   R+ T N+E+D T+  TR  +G VRR+SV+V V+++      +G+  + 
Sbjct: 383 SGTATNGNSSSTRDTTTNYEVDKTVRRTRAAVGTVRRLSVAVVVNYR-----GDGKTWK- 436

Query: 386 ARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFMDQLVEDVPAPELWEQP----WFWR 441
             +E E+  +  L++ AVGF A+RGD + VV   F   L        LW+QP    +  +
Sbjct: 437 PLSEAEMVKLNALVKDAVGFDAKRGDSVNVVNSQFSGTLPTPKDDLPLWKQPEMIQYGIQ 496

Query: 442 AVKLGVGALVILVLILAVVRPMLKRLIYPDRVNMPE-DGRLGNE-LAEIEDQYAADTLGM 499
             K    A+  L+L+ AV+RP ++ +   D    P   GR G +  A I    AA     
Sbjct: 497 GAKYLALAIGFLILVFAVIRPAIRSMGKKDEPATPTFVGREGEDPNAPIITGAAASAGPE 556

Query: 500 LNTKEAEYSYADDGSILIPNLHKDD--DMIKAIRALVANEPELSTQVVKNWLQD 551
           L    A  + +++    +P L  +D    ++ +R +  + P     V+K W+ +
Sbjct: 557 LEGPAAAGAESEELPDALPQLKNNDFEKKLETMRRVAQSNPRAVAAVIKQWVSN 610