Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 599 a.a., flagellar M-ring protein FliF from Paraburkholderia bryophila 376MFSha3.1

 Score =  231 bits (590), Expect = 5e-65
 Identities = 175/573 (30%), Positives = 290/573 (50%), Gaps = 52/573 (9%)

Query: 12  GVLGNLG----GVDMMR---QITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMV 63
           G+ GN G    G+  MR   +  +I A+A+ +A+   + +W++ P+Y+ L   +  ++  
Sbjct: 44  GLGGNFGQRLSGLAQMRGNPRAPLIFAVALLVAVVAGLFLWSRAPDYKVLYSNLSDRDGG 103

Query: 64  QVLDVLDKNKIKYQIDVD--VVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGV 121
            ++  L +  I Y+       + VP ++  E+++ L+  G+  + +   + L  +  FG+
Sbjct: 104 AIITALQQANIPYKFSESGGAILVPAEQVHEMRLRLASQGLPKSGSVGFE-LMDNQKFGI 162

Query: 122 SQRMEQARLKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRG 181
           SQ  EQ   + + E  L R IE + SV  A+V LA+PK +VF R+   PSA+V++N   G
Sbjct: 163 SQFAEQINYQRALEGELERTIESVSSVKSARVHLAIPKPSVFVRDKEAPSASVLVNLYPG 222

Query: 182 -GLGQGEVDAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGVSARARRELELVQQKE 240
             L +G+V AI  +V+SAV  +    VT+ D +G LL   S  G       +L+  QQ E
Sbjct: 223 RALDEGQVLAITHMVSSAVPEMPVKGVTILDQDGNLLTQPSVGG--GLDASQLKYRQQIE 280

Query: 241 TEYRTKIDSILSPILGHDNFTSQVDVSMDFTAVEQTAKRF----NPDLPSLRSEM--TVE 294
              + +ID+IL+P+ G  N  SQV   +DF+  EQT++ +    NP   ++RS+   T  
Sbjct: 281 RNTQQRIDAILAPLFGAGNAHSQVSADIDFSRSEQTSENYGPNGNPQQAAIRSQQSSTAT 340

Query: 295 NNSTGGSTGGIPGALSNQPPMESNIPQEAATAATESVAAG--NSHREATRNFELDTTISH 352
             S GG++ G+PGALSNQPP  ++ P  A   A+  V     +  ++ T N+ELD T+ H
Sbjct: 341 EMSQGGAS-GVPGALSNQPPQPASAPINAPNGASGGVTTTPVSDRKDMTTNYELDKTVRH 399

Query: 353 TRQQIGVVRRVSVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDV 412
             Q +G V+R+SV+V V++     G+ G       T  +L  + +L++ A+GF AQRGD 
Sbjct: 400 LEQPMGGVKRLSVAVVVNYLRVVDGK-GHATMQPVTADKLAQVNQLVKDAMGFDAQRGDS 458

Query: 413 LEVVTVPFMDQLVEDVPAPELWEQPWFWR-----------AVKLGVGALVILVLILAVVR 461
           + VV  PF   +  +       + PW WR           A  LG+GA V L L   +V+
Sbjct: 459 VNVVNSPFTADVDPNA------DLPW-WRTHDMLALYKQIATYLGIGA-VALFLYFVMVK 510

Query: 462 PMLKRLIYPDRVNMPEDGRLGNELAEIEDQYAADTLGMLN--TKEAEYSYADDGSILIPN 519
           P L+R  +P     P +  +   L   ++    D +          E    D   + + N
Sbjct: 511 PALRR-AFP-----PPEPLVAAALPSPDEPILLDGIPTAERANGNVEIDSGDSELLALEN 564

Query: 520 L-HKDDDMIKAIRALVANEPELSTQVVKNWLQD 551
             HK +  ++  R++   +P++   VVKNW+ D
Sbjct: 565 AKHKYERNLEFARSIARQDPKIVATVVKNWVTD 597