Pairwise Alignments

Query, 553 a.a., flagellar M-ring protein FliF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 603 a.a., flagellar M-ring protein FliF from Burkholderia phytofirmans PsJN

 Score =  228 bits (582), Expect = 4e-64
 Identities = 165/555 (29%), Positives = 278/555 (50%), Gaps = 26/555 (4%)

Query: 17  LGGVDMMR---QITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMVQVLDVLDKN 72
           L G+  MR   +  +I A+A+ +A+   + +W++ P+Y+ L   +  ++   ++  L   
Sbjct: 53  LSGLAQMRGNPRAPLIFAVALLVAVVAGLFLWSRAPDYKVLYSNLSDRDGGAIITALQAA 112

Query: 73  KIKYQIDV--DVVKVPEDKYQEVKMMLSRAGIDSAATSKQDFLTQDSGFGVSQRMEQARL 130
            I Y+       + VP ++  E+++ L+  G+  + +   + L  +  FG+SQ  EQ   
Sbjct: 113 NIPYKFSDAGGAILVPAEQVHEMRLRLASQGLPKSGSVGFE-LMDNQKFGISQFAEQINY 171

Query: 131 KHSQEENLARAIEQLQSVSRAKVILALPKENVFARNTAQPSATVVINTRRG-GLGQGEVD 189
           + + E  L R IE + SV  A+V LA+PK +VF R+   PSA+V++N   G  L +G+V 
Sbjct: 172 QRALEGELERTIESISSVKSARVHLAIPKPSVFVRDKEAPSASVLVNLYPGRALDEGQVL 231

Query: 190 AIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGVSARARRELELVQQKETEYRTKIDS 249
           AI  +V+SAV  +    VT+ D +G LL   S    S     +L+  QQ E   + +ID+
Sbjct: 232 AITHMVSSAVPDMPVKGVTILDQDGNLLTQLSTG--SGLDASQLKYRQQIERSTQQRIDA 289

Query: 250 ILSPILGHDNFTSQVDVSMDFTAVEQTAKRF----NPDLPSLRSEMTVE-NNSTGGSTGG 304
           IL+P+ G  N  SQV   +DF+  EQT++ +    NP   ++RS+ +      + G+  G
Sbjct: 290 ILAPLFGSGNAHSQVSADIDFSHSEQTSENYGPNGNPQQAAIRSQQSSSATEMSQGAASG 349

Query: 305 IPGALSNQPPMESNIPQEAATAATESVAAGNSHR-EATRNFELDTTISHTRQQIGVVRRV 363
           +PGALSNQPP  ++ P  A   A+       S R ++T N+ELD T+ H  + +G ++R+
Sbjct: 350 VPGALSNQPPQPASAPINAPNGASGVTTTPVSDRKDSTTNYELDKTVRHLERPMGGIKRL 409

Query: 364 SVSVAVDFKPGAAGENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFMDQ 423
           SV+V V++        G       T  +L  + +L++ A+GF   RGD + VV  PF  +
Sbjct: 410 SVAVVVNYL-RVVDAKGHATMQPVTADKLAQVNQLVKDAMGFDQARGDSVNVVNSPFSTE 468

Query: 424 LVEDVPAPELWEQPWFWRAVK-----LGVGALVILVLILAVVRPMLKRLIYPDRVNMPED 478
           +  +   P  W  P      K     LG+GA V L L   +V+P L+R   P        
Sbjct: 469 VDPNADLP-WWRTPDMIALAKQIATYLGIGA-VALFLYFVMVKPALRRAFPPPEPAAVAA 526

Query: 479 GRLGNELAEIEDQYAADTLGMLNTKEAEYSYADDGSILI--PNLHKDDDMIKAIRALVAN 536
               +E   ++   AA+ +G   T  +      D  +L      HK +  ++  R++   
Sbjct: 527 LASPDEPILLDGIPAAERMGANGTSSSVAELEGDSELLALESAKHKYERNLEFARSIARQ 586

Query: 537 EPELSTQVVKNWLQD 551
           +P++   VVKNW+ D
Sbjct: 587 DPKIVATVVKNWVSD 601