Pairwise Alignments

Query, 316 a.a., flagellar assembly protein FliH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., Flagellar assembly protein FliH from Pseudomonas syringae pv. syringae B728a

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 27/238 (11%)

Query: 58  VAVETVAPPTMAEIEDIRAQAEEEGFNEGKTQGHIEGLEQGRLEGLEQGHKEGFTQGHEQ 117
           V ++ V P T+ E+E IR +A  EGF  G+                    KEGF     +
Sbjct: 53  VPLDEVQPLTLEELESIRQEAWNEGFATGE--------------------KEGFHSTQLK 92

Query: 118 GLETGLAEAKALLSRFEGLLCQFEKPLQLLDGDIEHTLMSLTMALAKSVIGHELKTHPEQ 177
             +       A ++  E L+     P+   D  IE  ++ L   +A+ VI  EL T   Q
Sbjct: 93  VRQEAEVVLAAKVASLEQLMGNLLAPIAEQDTQIEKAVIYLVEHIARKVIQRELVTDSAQ 152

Query: 178 ILSALRLGVESLPIKEQTVNLRMHPDDVTLVETLYSSTQLTRNQWQLEADPSLTAGDCII 237
           I S LR  ++ LP+  Q V + ++P D  LV+ +    +     W++  D  L  G C I
Sbjct: 153 IASVLRDALKLLPMGAQNVRIFINPQDFLLVKAM---RERHEESWKIVEDEDLLPGGCRI 209

Query: 238 SSQRSLVDLTLSSRIDAVFESLRNQQSHLALQQQQRQAALDEENAAKIVPESIKDADE 295
            ++ S +D ++ +RI      + +Q      +Q    AA D      + P    +A+E
Sbjct: 210 ETEHSRIDASVETRIALAISKMHDQLH----EQVTHPAAADLSVDLDVSPGKASNAEE 263