Pairwise Alignments

Query, 316 a.a., flagellar assembly protein FliH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 245 a.a., flagellar assembly protein FliH from Ralstonia sp. UNC404CL21Col

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 14/224 (6%)

Query: 52  QQAPKAVAVETVAPPTMAEIEDIRAQAEEEGFNEGKTQGHIEGLEQGRLEGLEQGHKEGF 111
           +QA +A A     PP          + EE   +E + Q     L+       ++G ++GF
Sbjct: 25  RQAAEAAAAAAPPPPP--------PEPEEPPISEEEWQA---ALDAELATARDEGRRDGF 73

Query: 112 TQGHEQGLETGLAEAKALLSRFEGLLCQFEKPLQLLDGDIEHTLMSLTMALAKSVIGHEL 171
            QG + G E G  + +        L+    + +  L+G +   L+ L + LA+  +   L
Sbjct: 74  AQGFQDGFEQGRRQGEEDSKHIAALMQSVREAIDQLNGSVAEELVDLALQLAQQFLHGAL 133

Query: 172 KTHPEQILSALRLGVESLPIKEQTVNLRMHPDDVTLV-ETLYSSTQLTRNQWQLEADPSL 230
              PE+IL  +R  +   P       LR+H DD  L+ +TL   T+L    W L  D ++
Sbjct: 134 HAQPERILPMVREVLGDAPTAPAPAMLRVHADDAELIRQTL--GTELAAAGWTLIVDAAI 191

Query: 231 TAGDCIISSQRSLVDLTLSSRIDAVFESLRNQQSHLALQQQQRQ 274
             G C + ++    D TL +R   +  +L    + LA ++ + +
Sbjct: 192 ERGGCRVQTRFGETDATLQTRWAELTRALGRDTAWLASERSEAE 235