Pairwise Alignments

Query, 343 a.a., flagellar motor switch protein FliM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 332 a.a., flagellar motor switch protein FliM from Paraburkholderia bryophila 376MFSha3.1

 Score =  293 bits (750), Expect = 4e-84
 Identities = 133/323 (41%), Positives = 209/323 (64%)

Query: 3   DLLSQDEIDALLHGVDDVEEDNELDAVGQEARSYDFSSQDRIVRGRMPTLEIVNERFARH 62
           + +SQ+E+DALL GV    +     +     R Y+ ++Q+RIVRGRMP LEI+N+RFAR 
Sbjct: 5   EFMSQEEVDALLKGVTGESDSEAEQSERVGVRPYNIATQERIVRGRMPGLEIINDRFARL 64

Query: 63  LRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEARLVF 122
           LR+ +FN MRR+AE+S+  V++ K+ E+   L +PT+LN+V   PL+GT+L   +  LVF
Sbjct: 65  LRVGIFNFMRRSAEISVGPVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVF 124

Query: 123 ILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSEV 182
            +VDN FGGDGRFH ++EGR+FT TE+RI+  LL + FE Y  +W  V  ++F+Y+ SE+
Sbjct: 125 FVVDNLFGGDGRFHTRVEGRDFTQTEQRIIMKLLNLTFEHYAASWKSVRPLQFEYMRSEM 184

Query: 183 NPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDMR 242
           +   AN+ +P E+V++  F IE    GG  HI MPYSMIEPIR++L + +Q +  + D R
Sbjct: 185 HTQFANVATPNEIVIVTQFSIEFGTTGGTLHICMPYSMIEPIRDILSSPIQGEALEVDRR 244

Query: 243 WSQALHDEIMDVKVGFDATVVEHELTLKDVMNFKAGDIIPIELPEYIMMRIEDLPTYRCK 302
           W + L  ++   +V   A + +  +T + ++N + GD++PI +PE+I  +++ +P   C 
Sbjct: 245 WVRVLSQQVQAAEVELTADLAQVPITFEQILNMRKGDVLPINIPEHITAKVDGVPVMECG 304

Query: 303 MGRSRDNLALKIYEKIPRPETVK 325
            G      AL++ + I   +T+K
Sbjct: 305 YGIFNGQYALRVQKMISAADTMK 327