Pairwise Alignments

Query, 89 a.a., flagellar biosynthetic protein FliQ (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 86 a.a., type III secretion protein, HrpO family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 47.8 bits (112), Expect = 3e-11
 Identities = 25/72 (34%), Positives = 43/72 (59%)

Query: 12 EALAVIVMMVSAIVLPGLGIGLIVAVFQAATSINEQTLSFLPRLIVTLLALMLMGHWLVQ 71
          +AL +++M+    ++    IG+++++ QA T + EQTL+F  +LI  +L L LMG W   
Sbjct: 11 KALYLVLMLSMPPIVVASVIGILISLVQAITQLQEQTLTFGVKLIAVVLTLFLMGGWFGA 70

Query: 72 TLMDFFIEMVNR 83
           L+ F  E+  R
Sbjct: 71 ELLRFADEIFVR 82