Pairwise Alignments

Query, 699 a.a., flagellar biosynthesis protein FlhA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 720 a.a., flagellar biosynthesis protein FlhA from Azospirillum brasilense Sp245

 Score =  516 bits (1330), Expect = e-150
 Identities = 272/679 (40%), Positives = 432/679 (63%), Gaps = 8/679 (1%)

Query: 27  VLAALAMIVLPIPPFLLDILFSFNIALALVVLLVAIYTDRPLDFAAFPTVLLVATLLRLA 86
           ++  +  ++LP+PP LLD++   N+ +++++L+V ++ ++PL+ +A+PT+LL+ TLLRL+
Sbjct: 42  IMLIVVGLILPLPPMLLDMMLGLNVTISVLILMVVLFIEKPLELSAYPTILLITTLLRLS 101

Query: 87  LNVASTRVVLLEGHNGGDAAGKVIEAFGSVVIGGNYAVGVVVFIILIIINFAVVTKGAGR 146
           LN+ASTR++L +GH G  AAG VIEAF   V+GG++ +GV+V+ IL I+NF V+T G+GR
Sbjct: 102 LNMASTRLILTQGHEGTAAAGHVIEAFAGFVMGGDFIIGVIVYAILTIVNFKVITAGSGR 161

Query: 147 IAEVSARFTLDAMPGKQMAIDADLNAGIINQDQARTRRAEVTREADFYGAMDGASKFVKG 206
           IAEV+ARFTLDAMPGKQMAIDADL+AG+I++  AR +R E+  E+ F+G+MDGASKFVKG
Sbjct: 162 IAEVAARFTLDAMPGKQMAIDADLSAGMIDETTARAKRKELEDESAFFGSMDGASKFVKG 221

Query: 207 DAIAGIMILVINILGGFIIGIVQHGLTFAQAAEIYTLLTIGDGLVAQIPGLLLSIAAALM 266
           DA+AG+MI+ INI+GG  + ++++ +   QA + +T LTIGDGLV+QIP L++SI+A  +
Sbjct: 222 DAVAGLMIMFINIIGGVSLAVLRYDMPIMQALDTFTKLTIGDGLVSQIPALVISISAGFL 281

Query: 267 VTRQNESGDMGQMLMSQMFDSHKSLGIAAGVLFVMGIVPGMPHMAFLSFAVMTGGAAYFV 326
           V++    G   + ++ Q+ +   +LG++AG + ++ ++PGMP + FL      G AA+++
Sbjct: 282 VSKAGTGGSTDKAVVGQLTNHVSALGLSAGAIGLLALMPGMPMLPFLPVVAAVGAAAWYL 341

Query: 327 FKRNEAKRAK-----ALEQVKTGPTERTEREPKELSWDDVHHVDTIGLEVGYRLIPLVDK 381
            K    K A+     A E    G          +        +D I LE+GY L+ L+++
Sbjct: 342 PKMRAKKEAEEAEAAAAEAAGMGGPGGGAAPVADDPIATALAIDLIRLELGYGLLSLINQ 401

Query: 382 GQGG--ELLSRIKGVRKKLSQELGFLVPAVHIRDNLDLSPNAYRISLMGVVVGEADIRHD 439
            Q G   L  +IKG+R++++ E+GF++PAV I+DNL L PNAY I +  +  G  DIR +
Sbjct: 402 PQAGSHRLTDQIKGLRRQIAGEVGFVMPAVRIQDNLQLPPNAYIIRVKEIEAGRGDIRPN 461

Query: 440 CELAINPGQVYGKLDGIETRDPAFGLEAVWIAPELREHAQTLGYTVVDAATVVATHISQI 499
             L ++P      L G +T +P FGL A+WI P  RE A   GYTVVD +TV+ TH++++
Sbjct: 462 MLLVMDPRGEAMSLPGEQTVEPTFGLPAIWIEPGYREEALFKGYTVVDPSTVITTHLTEL 521

Query: 500 LTNNAAKLLGYEEAQQLMDMLAKHSPKLVDGFIPDVMPLGNVVKVMQNLLNEGVSVRDLR 559
           + +N  +LL + E Q+L+D L K   KL+   +P  + +G + +V+QNLL E VSVRDL 
Sbjct: 522 IKDNMPELLSFTETQKLLDELDKEHQKLIADVVPAQITVGGLQRVLQNLLAERVSVRDLA 581

Query: 560 TIVQTLLEYGTKSNDTEVLTAAVRIALKRMIVQEISGPELEIPVITLAPELEQMLHQSMQ 619
           TI++ + E  +++     +T  VR  L R I          IP++TL+PE EQ   +S+ 
Sbjct: 582 TILEGVSEAASQTRSITQITEHVRTRLARQICDANINEMGVIPLVTLSPEWEQAFAESLV 641

Query: 620 ATGGDGP-NIEPGLAERMQQSLADAAQKQEMVGQPAILLTSGMLRATLSRFVKYTIPNLR 678
             G D    + P   ++   S+    ++  M+G+  +LLTS ++R  +   V+   P   
Sbjct: 642 GDGDDRQLTMAPSRLQQFITSVRQTFERHAMMGETPVLLTSPLIRPFVRSIVERFRPATV 701

Query: 679 VISYQEIPDEKQIRIVSAV 697
           V+S  EI  + +I+ +  +
Sbjct: 702 VMSQNEIHPKARIKTLGQI 720