Pairwise Alignments

Query, 699 a.a., flagellar biosynthesis protein FlhA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 697 a.a., flagellar biosynthesis protein FlhA from Pantoea sp. MT58

 Score =  709 bits (1831), Expect = 0.0
 Identities = 365/692 (52%), Positives = 497/692 (71%), Gaps = 9/692 (1%)

Query: 12  QLKLSSFKG-----IGTPLLVLAALAMIVLPIPPFLLDILFSFNIALALVVLLVAIYTDR 66
           +L+L  FK      +  P+L+L  L+M+VLP+PPF+LD+LF+FNIAL++++LLVA++T R
Sbjct: 8   KLRLPGFKDMQWQVLAGPVLILMILSMMVLPLPPFILDLLFTFNIALSIMILLVAMFTQR 67

Query: 67  PLDFAAFPTVLLVATLLRLALNVASTRVVLLEGHNGGDAAGKVIEAFGSVVIGGNYAVGV 126
            L+FAAFPT+LL +TLLRLALNVASTR++L+EGH G  AAG+V+EAFG  ++GGN+A+G+
Sbjct: 68  TLEFAAFPTILLFSTLLRLALNVASTRIILMEGHTGAAAAGQVVEAFGHFLVGGNFAIGI 127

Query: 127 VVFIILIIINFAVVTKGAGRIAEVSARFTLDAMPGKQMAIDADLNAGIINQDQARTRRAE 186
           VVFIIL+IINF V+TKGAGRIAEV ARF LD MPGKQMAIDADLNAG+I +D A+ RRAE
Sbjct: 128 VVFIILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDDAKRRRAE 187

Query: 187 VTREADFYGAMDGASKFVKGDAIAGIMILVINILGGFIIGIVQHGLTFAQAAEIYTLLTI 246
           VT+EADFYG+MDGASKFV+GDAIAGIMI+VIN++GG ++G+VQHG+    AAE YTLLTI
Sbjct: 188 VTQEADFYGSMDGASKFVRGDAIAGIMIMVINVIGGLLVGVVQHGMDAGHAAETYTLLTI 247

Query: 247 GDGLVAQIPGLLLSIAAALMVTRQNESGDMGQMLMSQMFDSHKSLGIAAGVLFVMGIVPG 306
           GDGLVAQIP L++S AA ++VTR     D+G+ +++Q+F   + L ++AGV+ ++G+VPG
Sbjct: 248 GDGLVAQIPALVISTAAGVIVTRVATDQDVGEQMVTQLFKDPRVLMLSAGVIGLLGLVPG 307

Query: 307 MPHMAFLSFAVMTGGAAYFVFKRNEAKRAKALEQVKTGPTERTEREPKELSWDDVHHVDT 366
           MP+  FL F     G A+++  R    + K                  E SW DV   DT
Sbjct: 308 MPNFVFLLFTAALLGLAWWLRGREAQPKKKVDVAGSISNKPADTPAATEASWTDVQLEDT 367

Query: 367 IGLEVGYRLIPLVDKGQGGELLSRIKGVRKKLSQELGFLVPAVHIRDNLDLSPNAYRISL 426
           +G+EVGYRLIP+VD  Q GELL RI+ +RKK++Q++GFL P VHIRDN++L P  YRI +
Sbjct: 368 LGMEVGYRLIPMVDHQQNGELLGRIRSIRKKVAQDVGFLPPVVHIRDNMELPPARYRILM 427

Query: 427 MGVVVGEADIRHDCELAINPGQVYGKLDGIETRDPAFGLEAVWIAPELREHAQTLGYTVV 486
            GV +G  D      +AINPG   G L G  T DPAFGL AVWI   L+E AQ  G+TVV
Sbjct: 428 KGVEIGSGDAYPGRWMAINPGTAAGSLPGEATVDPAFGLAAVWIDSALKEQAQIQGFTVV 487

Query: 487 DAATVVATHISQILTNNAAKLLGYEEAQQLMDMLAKHSPKLVDGFIPDVMPLGNVVKVMQ 546
           +A+TVVATH++ ++   A++L G +EAQQL+D + +  PKL +  +P V+ L  + KV+Q
Sbjct: 488 EASTVVATHLNHLIGQFASELFGRQEAQQLLDRVTQEMPKLTEDLVPGVISLTTLHKVLQ 547

Query: 547 NLLNEGVSVRDLRTIVQTLLEYGTKSNDTEVLTAAVRIALKRMIVQEISGPELEIPVITL 606
           NLL E VS+RD+RTI++TL E+    +D + LT+ VR+AL R I Q+      E+ VI L
Sbjct: 548 NLLVERVSIRDMRTIIETLAEHAPVQSDPQELTSVVRVALGRAITQQWFPGNDEVQVIGL 607

Query: 607 APELEQMLHQSMQATGGDGPNIEPGLAERMQQSLADAAQKQEMVGQPAILLTSGMLRATL 666
              LE++L Q++Q  GG    +EPGLA+R+      A Q+QEM+G P +LL +  LRA L
Sbjct: 608 DSTLERLLLQALQGGGG----LEPGLADRLLSQAQAALQRQEMLGAPPVLLVNHPLRALL 663

Query: 667 SRFVKYTIPNLRVISYQEIPDEKQIRIVSAVG 698
           +RF++  +P L V+S  E+ D +QIR+ + +G
Sbjct: 664 ARFLRRNLPQLVVLSNLELSDNRQIRMTATIG 695