Pairwise Alignments

Query, 127 a.a., chemotaxis protein CheY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 266 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 93.6 bits (231), Expect = 2e-24
 Identities = 45/122 (36%), Positives = 75/122 (61%)

Query: 3   KNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMPGM 62
           +++++L+VDD    R II+  L +LG     EA DG+ A+ ++++  FD VVTD+NMP +
Sbjct: 143 QDLRVLVVDDSRMARNIIRRTLSNLGMRQIVEACDGAEAIELMREQMFDLVVTDYNMPSV 202

Query: 63  QGIDLLKAIRADDSLKHLPVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLDKI 122
            G++L + IR +    H+P+LMV++EA    +    QAGVN    KPF    +K+ L ++
Sbjct: 203 DGLELTQFIRNESQQSHIPILMVSSEANDAHLSNVCQAGVNALCDKPFEPQLVKQILYQL 262

Query: 123 FE 124
            +
Sbjct: 263 LD 264



 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 32/123 (26%), Positives = 62/123 (50%)

Query: 5   MKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGDFDFVVTDWNMPGMQG 64
           + IL+V+   T R+II   L++ G  N + A     A  +L +   D + +  +      
Sbjct: 9   LSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASAMHYSDGDA 68

Query: 65  IDLLKAIRADDSLKHLPVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLDKIFE 124
           + LL  I++D   + +  ++V++E +REQ+    Q+GV   + KPF+   L + L+   +
Sbjct: 69  LKLLTYIKSDSRCQDIQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLGKALNATID 128

Query: 125 RLA 127
            L+
Sbjct: 129 LLS 131