Pairwise Alignments

Query, 340 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 340 a.a., UDP-glucose 4-epimerase (EC 5.1.3.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  441 bits (1133), Expect = e-128
 Identities = 221/336 (65%), Positives = 259/336 (77%), Gaps = 1/336 (0%)

Query: 1   MTRYEQIKQELLNSPKTWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQ 60
           M+RY ++   L  SP+ WLITGVAGFIGSNLLE LLKL+Q+VIGLDNFATG Q NLDEV+
Sbjct: 1   MSRYNELVATLPKSPRVWLITGVAGFIGSNLLETLLKLDQSVIGLDNFATGHQRNLDEVK 60

Query: 61  SLVTSEQWMRFSFINGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITG 120
             V+++QW RF+   GDIR    C     GVDYVLH+AALGSVPRS+ADPI TNA+NI G
Sbjct: 61  GEVSADQWARFTLKVGDIRTLDDCRNACEGVDYVLHEAALGSVPRSLADPILTNASNIDG 120

Query: 121 FLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYA 180
           FLNML AA++A VKSFTYAASSSTYGDHPALPKVE  IG PLSPYAVTKYVNELYA V+ 
Sbjct: 121 FLNMLVAARDAGVKSFTYAASSSTYGDHPALPKVEDVIGKPLSPYAVTKYVNELYADVFY 180

Query: 181 RTYGFETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDN 240
           ++YGF TIGLRYFNVFG+RQDPNGAYAAVIPKW ++MI  E++ INGDG TSRDFC+I+N
Sbjct: 181 KSYGFNTIGLRYFNVFGKRQDPNGAYAAVIPKWAAAMILDENININGDGSTSRDFCFIEN 240

Query: 241 VVQMNILAATAASE-AKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRA 299
           VVQ N+LAAT     A N VYNVAV  RT+L +L+  +K  L   G+N  + P Y+DFRA
Sbjct: 241 VVQANLLAATEEKNYALNNVYNVAVNARTSLEELFSMLKAMLADLGVNYAKEPVYKDFRA 300

Query: 300 GDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWY 335
           GDV HSQA + K    L Y   + + EG+  AMPWY
Sbjct: 301 GDVLHSQASIEKIKNNLSYVPDYSVAEGLRLAMPWY 336