Pairwise Alignments

Query, 501 a.a., polysaccharide biosynthesis domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 488 a.a., Membrane protein involved in the export of O-antigen and teichoic acid from Paraburkholderia bryophila 376MFSha3.1

 Score = 74.3 bits (181), Expect = 9e-18
 Identities = 69/350 (19%), Positives = 150/350 (42%), Gaps = 24/350 (6%)

Query: 4   QNIVASYFSQAYVTLIGIVILPLYIKFMGAEAYGLIGFFTLLQAWFSLLDLGLTPTIARE 63
           +N+  ++F     T + +V +P YI+ +G E YG+I     L  +F +LDLG++      
Sbjct: 7   KNVAINFFGLVLPTFVSLVTVPSYIRLLGVERYGVISLVWTLIGYFGILDLGMSMAAQNH 66

Query: 64  TSRFQSGVLSKLKFKQLYRALSAIFLIIALIGGLCLFYLSDLITNKWLNFNELDDNIVQI 123
            S+ ++   +K +  +++ + + + L   +IGGL +++ + L T  +   +    + V +
Sbjct: 67  ISKARASG-NKDESARVFWSATWLNLATGVIGGLIIYFGAFLYTAYFTKVSPELQHEVYM 125

Query: 124 CVQIMAISVAFRWMGGVYRGVITGSESIVWLSSFNAIIATIRFIGVFVSMYI-------F 176
            +  +A+++    +  V+ G I G+E          I  T + IG F+   +        
Sbjct: 126 ALPWLAVAIPIANVSWVFAGAINGAERF-------GIYNTNQTIGTFLFQLLPLGAALWL 178

Query: 177 GFTAYVFFVHQLAVAILEFIILFFKAEKIIPRRKDFTEDIGWSFEPIRSILSFALTIAFT 236
           G +        +   +L  I+L   A K++  R      +G +    + + +F   +   
Sbjct: 179 GASLQNVLAAAVFARVLAAILLGRSALKVLEIRSILPPQLGVA----KGLFNFGGWMLIA 234

Query: 237 SSVWVFVTQTDKLLLSGLLPLAEYGYFTLAVLVASAIMVASGPISNALMPRMVKLYAEDK 296
           S   +     D+++L   L      Y+T+   + + + +    +   L PR+  +   D 
Sbjct: 235 SVTNMIAESLDRVMLGTSLGARFVTYYTVPQNLVTRLNIVPTAMVRTLFPRLSAVGRADA 294

Query: 297 KDEMLDIYRKATQVVTVIAIPVTTTFVFSAKPLLIAWTGDVLIAEKASPI 346
                 I +++ + +  +  PV    +   +P L  W G+  IA  A+P+
Sbjct: 295 D----TITQQSLEFLNGVFTPVALIAMLVLEPFLHLWVGNE-IASVAAPV 339