Pairwise Alignments

Query, 185 a.a., galactosyl transferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 188 a.a., capsular polysaccharide synthesis protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  120 bits (302), Expect = 1e-32
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 1/172 (0%)

Query: 4   RLIDFLAAFFGLLLLWPILLIVT-IIGLFDTGSPIFIQTRVGKHKKPFNLVKFRTMSKDT 62
           R+ D     F  + L+P+L+ V  +I +FD G  IF Q R+G++ K F+  KFR+M  +T
Sbjct: 8   RIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKFRSMPVNT 67

Query: 63  ASVASHLASNAAITKFGGFLRKTKIDELPQLINVLKGEMSLVGPRPNLFNQEELIAERDA 122
             + S    +  IT  G  +R+T +DELPQL NVLKG+MS+VGPRP + +Q +L+  R  
Sbjct: 68  GDIPSDKLGSIDITWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQLVELRKQ 127

Query: 123 LGVYNVLPGVTGLAQVQNIDMSTPKLLAQTDKQMIDTLTLRSYFKYILMTAT 174
            G     PG+TGLAQV   D  T +  A  D +    ++  +  K IL T T
Sbjct: 128 NGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAEYARKVSFLTDVKIILRTFT 179