Pairwise Alignments

Query, 185 a.a., galactosyl transferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 649 a.a., WecB/TagA/CpsF family glycosyl transferase (RefSeq) from Shewanella sp. ANA-3

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 65/150 (43%), Positives = 85/150 (56%), Gaps = 16/150 (10%)

Query: 4   RLIDFLAAFFGLLLLWPILLIVTI-IGLFDTGSPIFIQTRVGKHKKPFNLVKFRTMSKDT 62
           R +D L A   +LLL P+LLIV + I L   G+ +F Q RVGK  +PF + KFR+M +D 
Sbjct: 456 RCLDILVAAIAILLLSPLLLIVALLIRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQDA 515

Query: 63  AS--------------VASHLASNAAITKFGGFLRKTKIDELPQLINVLKGEMSLVGPRP 108
            +              V   +  +  IT+ G F+RKT IDELPQL NVLKGEMSLVGPRP
Sbjct: 516 ETRLASLQQANEMQGGVLFKMKQDPRITRVGQFIRKTSIDELPQLWNVLKGEMSLVGPRP 575

Query: 109 NLFNQEELIAERDALGVYNVLPGVTGLAQV 138
            L  +    +  D   +  V PG+T + QV
Sbjct: 576 ALPREVAQYSPSDRRRL-EVKPGITCIWQV 604



 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 27/103 (26%)

Query: 3   IRLIDFLAAFFGLLLLWPILLIVTIIGLFDTGSPIFIQTRVGKHKKPFNLVKFRTMSKDT 62
           IRL D   A   LLL  P +L+V +      G  +F +  V   +    L +F       
Sbjct: 13  IRLFDSAIAMLALLLCSPFILVVYLYRK-SQGQSVFERVYVHGGRNQIGLWQFAYQG--- 68

Query: 63  ASVASHLASNAAITKFGGFLRKTKIDELPQLINVLKGEMSLVG 105
                            G+        LPQL N+LKG++ L+G
Sbjct: 69  ----------------AGY-------RLPQLFNLLKGDIGLLG 88