Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 130 a.a., histone family protein nucleoid-structuring protein H-NS (RefSeq) from Shewanella loihica PV-4

 Score =  195 bits (496), Expect = 2e-55
 Identities = 97/130 (74%), Positives = 112/130 (86%)

Query: 1   MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE 60
           MSEFL+ILTHGRRFKAAVKDLSVE+L+D+A KL+KI+ E+E    EE   +A RNAKIEE
Sbjct: 1   MSEFLDILTHGRRFKAAVKDLSVEDLKDVAVKLEKIITEKEKQAEEESAVMAERNAKIEE 60

Query: 61  IRQQMEAVGLSIDDLGGVAVKASSKKRAPRPAKYQIEVDGEVIQWTGQGRMPTVFKNEVN 120
           IRQQMEAVGLSIDDLG VA K + KKRAPRP KY+IEV+GE I WTGQGR PTVFKNE++
Sbjct: 61  IRQQMEAVGLSIDDLGTVAAKPAPKKRAPRPPKYKIEVNGETITWTGQGRTPTVFKNELD 120

Query: 121 KGRSMDDFLI 130
           KGRS++DFLI
Sbjct: 121 KGRSLEDFLI 130