Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 109 a.a., H-NS histone family protein from Dyella japonica UNC79MFTsu3.2

 Score = 42.7 bits (99), Expect = 2e-09
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 12/115 (10%)

Query: 18  VKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEEIRQQMEAVGLSIDDLGG 77
           +K+L+  +L DL AK      E    +  +L+         E+I   ++A G + DD+ G
Sbjct: 5   IKNLNHNQLNDLIAKAQSRQTELRKDKVVKLR---------EKIHALIKAEGFAFDDVFG 55

Query: 78  V--AVKASSKKRAPRPAKYQIEVDGEVIQWTGQGRMPTVFKNEVNKGRSMDDFLI 130
              AVK   K     P KY+   D E   W+G+G+ P  F + +  G+   D  I
Sbjct: 56  QGRAVKGPRKSGGIVPPKYRNPADPEQT-WSGRGKRPRWFNDALKAGKKEKDLAI 109