Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 101 a.a., endonuclease from Cupriavidus basilensis FW507-4G11

 Score = 50.1 bits (118), Expect = 9e-12
 Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 10/105 (9%)

Query: 27  RDLAAKLDKILVERESMEAEELQAIAARNAKIEEIRQQMEAVGLSIDDLGGVAVKASSKK 86
           +++  K+ ++  + E ++A E  ++ A      +IRQ+++  GL+ DDLG     A+ KK
Sbjct: 5   QEIVQKISELQKQAEEIKAREQASVIA------DIRQKIDQYGLTADDLGFGTKPAAGKK 58

Query: 87  RAPR-PAKYQIEVDGEVIQWTGQGRMPTVFKNEVNKGRSMDDFLI 130
              + P +Y+   D     WTG+G+ P      +  G++++DFLI
Sbjct: 59  ATRKVPVRYR---DSAGNTWTGRGKRPGWLTQALAAGKTIEDFLI 100