Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 108 a.a., DNA-binding protein H-NS from Paraburkholderia bryophila 376MFSha3.1

 Score = 41.2 bits (95), Expect = 4e-09
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 54  RNAKIEEIRQQMEAVGLSIDDLGGVAVKASSKKRAPRPAKYQIEVDGEVIQWTGQGRMPT 113
           R++ I  +R +ME  G+  +DL   A   +S+  A + A+Y+    G+   W GQG MP 
Sbjct: 6   RDSMIAYLRHRMEEFGIKPEDL---AALLASEPAAQKNARYR-SATGD--SWDGQGEMPQ 59

Query: 114 VFKNEVNKGRSMDDF 128
             K  ++ G+S+D F
Sbjct: 60  WLKQAISAGQSIDHF 74