Pairwise Alignments

Query, 609 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  794 bits (2050), Expect = 0.0
 Identities = 393/607 (64%), Positives = 484/607 (79%)

Query: 1   MFKRFESWVEALPDGEPTKPPTGVYAFCRHYTKGYELPLILMSVLTAFIAMLEVSLFGFM 60
           MF+ FE   E  P  EP  PP  + AFCR+YT+G+E PL+LMS+L+A +AM EV+L  +M
Sbjct: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62

Query: 61  GQLVDWLVKKSPETLYQDEGSTLILMGVMVLVVMPLLVLFHALIMHQTLLGNYPMSIRWL 120
           G++VD L  +     ++  G  L  M  +VLVVMP+L L H++++HQT+LGNYPMSIRW 
Sbjct: 63  GEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRWS 122

Query: 121 AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVMKLLDVLVYILVYFTSMLVMVASA 180
            HRYLLKQS+ F+Q DFAGR+ATKVMQ + +VRETV+KL+D+ VYI VY  SMLVM+A A
Sbjct: 123 THRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182

Query: 181 DVRLVIPMLIWLALYIGLQWYFVPRLKTVSTEQADARSTMTGRIVDSYTNITTVKLFAHT 240
           D  LV+P+L+WL  YI +Q YFVPRLKT+ST+QA+A+S MTGRIVD+YTNITTVKLF+H+
Sbjct: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242

Query: 241 DKEADYAKASMRSFLDTVYRQMRLVTGISVSVQIINYMLAFSIAAVSIALWSDNAISVGA 300
            +E  YAK+ M+ FL TVYRQMR +T +  SV +INY+L FSIAA+SI LW    ++VG 
Sbjct: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGV 302

Query: 301 IAIAVSLALRLNGMSQWIMWEISSLFENIGTVTDGMNTLSKTTLIQDSPDANTLVVKQGQ 360
           IAI +++ALR+ GMS+WIMWEI +LFE++GTV D MNT++    I+D P A +L VK G+
Sbjct: 303 IAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE 362

Query: 361 IDFNQVSFHYGEDAGVIDELNLNIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGHICI 420
           + F+QV F Y     V D+LNL I+AGEKVG+VGRSGAGKSTLVNLL+RFYDV+ G I I
Sbjct: 363 LSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRI 422

Query: 421 DGQDIKAVKQDSLRSQIGMVTQDTSLLHRTIRENILYGNPGASEIQLEHAIKQAQAHDFI 480
           DGQDI  V Q+SLR  IGM+TQDTSLLHR+IR+NILYGNP A +  +E A +QA AHDFI
Sbjct: 423 DGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFI 482

Query: 481 NELTDPNGNHGLDAQVGERGVKLSGGQRQRVAIARVLLKNAPILLLDEATSALDSEVEAA 540
            EL D  G  G D QVGERGVKLSGGQRQR+AIARVLLKNAPIL++DEATSALDSEVE+A
Sbjct: 483 QELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESA 542

Query: 541 IQESLYELMQGKTVIAIAHRLSTIAAMDRLIVLDQGRIVEQGTHQELIAAGGIYAQLWAH 600
           IQE+L+ LM GKTVIAIAHRLSTIAAMDRLIV+D+G+IVEQGTHQEL+A  GIYAQLWAH
Sbjct: 543 IQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWAH 602

Query: 601 QTGGFLG 607
           QTGGF+G
Sbjct: 603 QTGGFIG 609