Pairwise Alignments

Query, 609 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 604 a.a., MsbA-like saccharide exporting ABC transporter ATP-binding/permease subunits from Sinorhizobium meliloti 1021

 Score =  281 bits (720), Expect = 4e-80
 Identities = 190/578 (32%), Positives = 312/578 (53%), Gaps = 30/578 (5%)

Query: 37  LPLILMSVLTAFIAMLEVSLFGFMGQLVDWLVKKSPETLYQDEGSTLILMGVMVLVVMPL 96
           L  +L++VL + +A +   L+   G+LVD ++  +           +     M   +M +
Sbjct: 31  LAALLLTVLLSTLADVLTPLYS--GRLVDAVISGAAS-------DDVAWNAAMAAFMMLM 81

Query: 97  LVLFHALIM-HQTLLGNYPMSIRWL------AHRYLLKQSVSFYQNDFAGRIATKVMQTS 149
            + F A+I+ H T +G   ++++ +      A  ++ + S  ++ N FAG    KV +  
Sbjct: 82  ALSFGAIILRHVTFMGIVSLTLKMMSDIAAAAFHHIQRFSSDWHANSFAGSTVRKVTRGM 141

Query: 150 LAV---RETVMKLLDVLVYILVYFTSMLVMV-ASADVRLVIPMLIWLALYIGLQWYFVPR 205
            A+    +T++  L   + +LV  T+++        V + +  + ++A+ + L   +V  
Sbjct: 142 WALDLLNDTLLVALFPSIVMLVGSTALMAWYWPMMGVIIGLGSIAFIAVTVSLSLGYVAP 201

Query: 206 LKTVSTEQADARSTMTGRIVDSYTNITTVKLFAHTDKEADYAKASMRSFLDTVYRQMRLV 265
           + +++    D R  + G + D+ +  T VK F    +E       +R + +   R     
Sbjct: 202 MASLANSW-DTR--LGGALADAVSCNTVVKAFGAEGREDARLAKVLRKWENRTRRTWSRG 258

Query: 266 TGISVSVQIINYMLAFSIAAVSIALWSDNAISVGAIAIAVSLALRLNGMSQWIMWEISSL 325
           T    +   +  +L  ++   ++ LW+    + G I   ++    L G  + +   I +L
Sbjct: 259 TLNGTAQGAMLLVLRAAVIGFALLLWARGQATAGDITFVLTSFFILQGYLREVGMHIRNL 318

Query: 326 FENIGTVTDGMNTLSKTTLIQDSPDANTLVVKQGQIDFNQVSFHYGED-AGVIDELNLNI 384
             +I  + + +   ++   ++D P A  + + +G+I+F  V+FHYG   A + +  ++NI
Sbjct: 319 QRSINDMEELVAIHAQPLGVEDRPGAKPIRITEGEIEFRDVTFHYGAHRAPLYEGFSVNI 378

Query: 385 KAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGHICIDGQDIKAVKQDSLRSQIGMVTQDT 444
            AGE+VGLVG SG+GK+T + L+ R +D+  G I IDGQ+I    Q SLR QI +V Q+ 
Sbjct: 379 AAGERVGLVGHSGSGKTTFIKLIQRLHDLNAGEIRIDGQNIADFTQASLRQQIAIVQQEP 438

Query: 445 SLLHRTIRENILYGNPGASEIQLEHAIKQAQAHDFINELTDPNGNHGLDAQVGERGVKLS 504
            L HR++ ENI Y  PGA++  +E A + A AHDFI  L       G    VGERGVKLS
Sbjct: 439 ILFHRSLAENIAYARPGATQRDIEEAARLASAHDFIAALPK-----GYGTLVGERGVKLS 493

Query: 505 GGQRQRVAIARVLLKNAPILLLDEATSALDSEVEAAIQESLYELMQGKTVIAIAHRLSTI 564
           GG+RQRVAIAR  L +APIL+LDEATS+LDSE E  IQ+++  LM G+T + +AHRLST+
Sbjct: 494 GGERQRVAIARAFLADAPILILDEATSSLDSESEVLIQQAMERLMTGRTTLVVAHRLSTV 553

Query: 565 AAMDRLIVLDQGRIVEQGTHQELI-AAGGIYAQLWAHQ 601
            A+DRL+V D+GRI E+G H  LI   GGIY  L+  Q
Sbjct: 554 RALDRLLVFDRGRIAEEGDHGALIRVKGGIYRSLFERQ 591