Pairwise Alignments

Query, 345 a.a., S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., S-adenosylmethionine tRNA ribosyltransferase from Herbaspirillum seropedicae SmR1

 Score =  378 bits (970), Expect = e-109
 Identities = 194/340 (57%), Positives = 251/340 (73%), Gaps = 6/340 (1%)

Query: 3   VTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGTLVDKQFTDLLGMINPGDLMVFNNTR 62
           ++DF F+LP ELIA+ P+A+R+ASRLL + G    L D++F+D++ ++  GDL+VFN+TR
Sbjct: 4   LSDFDFELPPELIAQTPLAERSASRLLQVQG--AQLTDRRFSDIVDLLQAGDLLVFNDTR 61

Query: 63  VIPARLFGQKASGGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHLDGGYEMKMMARHD 122
           VI ARLFG K +GGK+E LVER+LD + + A VR+SKSP   + I L   +E+ +  R  
Sbjct: 62  VIKARLFGVKETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLADAFEVTVGERFG 121

Query: 123 ALFELQLLSELSILEVLEAVGHMPLPPYIDRPDEDADKERYQTVYNQNPGAVAAPTAGLH 182
             + L    +   L  LE  G +PLPPYID   +  D+ RYQTVY + PGAVAAPTAGLH
Sbjct: 122 EFYTLHFPEDAFAL--LEQYGSLPLPPYIDHEADAYDETRYQTVYAKEPGAVAAPTAGLH 179

Query: 183 FDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKMHSEWANVPQDVVDLIARTK 242
           FD A+LE L A+GV  AFVTLHVGAGTFQPVRV+++ +HKMHSEW  +P + V+ +   K
Sbjct: 180 FDQALLEQLAARGVQQAFVTLHVGAGTFQPVRVEDLSQHKMHSEWYTIPPETVEAVRAAK 239

Query: 243 AAGNRVVAVGTTSVRSLESAARASAGQLNAFSGDTDIFIYPGYQFQVVDAMVTNFHLPES 302
           AAG RV+AVGTTS+R+LES ++  +G L A S DT +FI PGY F+ VD +VTNFHLP+S
Sbjct: 240 AAGRRVIAVGTTSMRALESGSQ--SGALKAGSDDTQLFITPGYTFKTVDQLVTNFHLPKS 297

Query: 303 TLIMLVSAFAGYEHVMAAYQHAIKQKYRFFSYGDAMFVTK 342
           TL+MLVSAFAGYE + AAY HAI QKYRFFSYGDAM +T+
Sbjct: 298 TLLMLVSAFAGYELIRAAYAHAIAQKYRFFSYGDAMLLTR 337