Pairwise Alignments

Query, 327 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., DUF58 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (420), Expect = 7e-46
 Identities = 114/307 (37%), Positives = 169/307 (55%), Gaps = 8/307 (2%)

Query: 22  NGLPLFADGLHLTEKELLAC--QTIARAIPERHSRARANLAGHRSSLIKGRGMEFAEVRH 79
           + LPL A+G+ L  +ELLA   QT+    P R   ++    G   S   GRGM+F+EVR 
Sbjct: 5   HALPLHANGVSLCLEELLAYEQQTVHFLPPARQIWSQR--VGQHQSRRLGRGMDFSEVRQ 62

Query: 80  YQQGDDVRTIDWRVTARTGQTHTKLFIEERERPILLLLDLSQSLYFGSSLLLQSVQAGHL 139
           YQ GDD+RTIDWRVTARTG+ HTKLF EERER ++L +DLS S+ FGS LLL+SVQA HL
Sbjct: 63  YQAGDDIRTIDWRVTARTGKPHTKLFSEERERTVVLYIDLSPSMQFGSCLLLKSVQAAHL 122

Query: 140 ATTLGWNAINHGDRLGALIACESEHLELKPRSRRQGILQLISGLCRVHEQQLNQLGSHPR 199
           A+ L W A+   DR+GA+I      +E+KP SR++G+L +++  C   +Q +       R
Sbjct: 123 ASLLSWLAVKQQDRVGAVIDLGHRLIEIKPGSRQRGVLTILAA-CVEAQQHIPPTQPTTR 181

Query: 200 DPDHILRACQRLQRIAKPGSLIWIITDGSHF-TPQCIAPLTELKRHCDIGAYLITDPLRQ 258
               +      L R+    S + +I+D     T Q    L +L RH  +    I DPL Q
Sbjct: 182 TL-ALHEVLSTLNRLCPKDSEVVLISDFVDLDTEQHALSLRQLCRHNRVQLVQIHDPLEQ 240

Query: 259 GSLNLPKQFSLPVRDAEQDLVLTHHSYQAWLALQHQQQNDFI-AMMQKLRVHTQFIDAGR 317
           G  +      +      + L  + +S +A +    + Q + + ++   L +  + + +G 
Sbjct: 241 GDTSFRGIEQVQNNQETRWLNFSINSTRAGIKKAFETQKEKLKSLCLLLEMDYRSVSSGI 300

Query: 318 PLAEQLA 324
           PL +QL+
Sbjct: 301 PLLQQLS 307