Pairwise Alignments

Query, 305 a.a., hemK family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 286 a.a., HemK family modification methylase (RefSeq) from Shewanella sp. ANA-3

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 5/210 (2%)

Query: 63  EKHKIVELIIRRVRERLPVPYLTNKARFAGLEFYVDERVLVPRSPIAEMIANRFGPWLYG 122
           E+ K  + +++R ++ +PV ++  +  F  L F V++  L+PR     ++       L  
Sbjct: 55  EQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETALNLPLES 114

Query: 123 KPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQVNVETLGVMDRVFPMQS 182
               ++LDL TG+G IA+A A E    ++ A+D  EDA+ +A+ N   L  +++V  +QS
Sbjct: 115 NA--KVLDLGTGTGAIALALASERATWQITAVDKVEDAVALAKANRTNLK-LEQVEILQS 171

Query: 183 DLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYHHEPAIGLASGRDGLDLTKRILANAA 242
           D FSAI +   +DLIVSNPPY+DE D      +   EP   L +  +G      I   A 
Sbjct: 172 DWFSAI-KAHDFDLIVSNPPYIDEADEHLHQGDVRFEPQSALTAADEGFADLYYIAKTAR 230

Query: 243 QYLTPTGILVVEVG-NSMVHLMEQFPEVPF 271
            YL P G +++E G    V L E+  E+ +
Sbjct: 231 DYLKPNGYILLEHGFEQAVKLREKLTELGY 260