Pairwise Alignments

Query, 700 a.a., ferric alcaligin siderophore receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 826 a.a., TonB-dependent siderophore receptor precursor from Pseudomonas fluorescens FW300-N1B4

 Score =  304 bits (779), Expect = 1e-86
 Identities = 223/708 (31%), Positives = 333/708 (47%), Gaps = 52/708 (7%)

Query: 25  VGAKDLHDKRYKTPAMNTATGLDLSYLETPQSVTSVTRQMMQDQQLNSVIEAMTSVAGIN 84
           +GA       Y T A+    G + S  ETPQS+T +TR+M+ DQ LN++ + M    GI 
Sbjct: 137 LGATTEGSNSYTTGAVTIGKG-EHSLRETPQSITVITRKMLDDQNLNTIEQVMEKTPGIT 195

Query: 85  ARPMDNDRYSISSRGIAVTS-ILYDGVPTTYDTRFNYGDNL-IDTAIYERVEIVRGATGL 142
                       SRG  +T    YDGVP    + +   D    D AIY+RVE++RGA G+
Sbjct: 196 VYDSPMGGKYFYSRGFRMTGQYQYDGVPLDIGSSYVQADAFNSDMAIYDRVEVLRGAAGM 255

Query: 143 MTGAGNPSAAINLVRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLTDSGNIRGRVVAAY 202
           M GAG  +  +N VRKR         S+S G+W+N RG VD    L D+G IRGR V   
Sbjct: 256 MKGAGGTAGGVNFVRKRGQDTPHTQLSLSAGTWDNYRGQVDTGGPLNDAGTIRGRAVVTQ 315

Query: 203 QDKESFQDRYQQQRTTLYGIVETDISDSTLLTLGADYQDTTPEATMS-GGLPLFHSDGSR 261
           Q ++ F D  +++    YG ++ D+SD T L LG  Y+D   +AT   GGLP + +DGS 
Sbjct: 316 QTRQYFYDVGERRDQIYYGALDFDLSDYTTLGLGMAYEDV--DATPCWGGLPRY-ADGSD 372

Query: 262 TNYDRATSTAPDWASAHTQGLNSFASLEHRFDNGWELK--GTYSYGDNSLEYNVLWATGY 319
               R+T     W +  ++    F  L+H F++ W LK  G YS     +EY       +
Sbjct: 373 LKLSRSTCLNTAWNNQRSKRATYFGDLKHEFNDNWALKVAGVYSKNTQDMEY------AF 426

Query: 320 PDPVTNLGATAGSIAYI----DGSRTQHNLDLRAQGMFALFGQEHQLTFGWTGQRQEFAN 375
           P     +GAT+ S A I    D  +  + LD    G F  FGQEH+L  G    R     
Sbjct: 427 PSGSVPVGATSTSTAMIGSIFDYDQVDYGLDAYVDGKFDAFGQEHELIVGANASRSH--K 484

Query: 376 PYYYPTAAVPPLGDFRDPNFQYPKPQWKETHTTGSFG-----ETEQSAAYVATQLNLTDA 430
             +Y  A +P   +  +PN   P+P         S G       +Q  AY   +L L D 
Sbjct: 485 DDFYAVALLPQTQNVLNPNHHLPQPDESFYLANASRGGPVDMRIKQYGAYSTARLKLADP 544

Query: 431 LALLAGLRLNQW--QTDQNNF------GSLYDFNVDNELTTYLGLTYALTEQYSLYASYT 482
           L  + G R++ +  +TD  +F       +  +     ++T +  L + + +  + Y SY 
Sbjct: 545 LTFVLGSRVSWYKSETDSVSFWRGEGTPTSSEAKETGQVTPFAALLFDINDNLTAYTSYA 604

Query: 483 DIFAPQ-TLQRIDASYIDPVKGKNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVL 541
           DIF PQ   + I+ S + P+ G++YE GIK    D  L+ S ++F   Q +  +      
Sbjct: 605 DIFTPQGNYKTINGSTLKPLIGQSYELGIKGEWFDGRLNSSFNLFRTVQKDAAQ-DDPAC 663

Query: 542 PGTTIPVYREVNGTQTQGFEFESTGKITDDWNIYFGYTQFSTD-------DPKGNRINTT 594
           P ++  +       + QGFE E +G++ D   +  GYT   T           G   NT 
Sbjct: 664 PDSSCSL--NSGKVRAQGFEAEVSGEVIDRLQLLAGYTYTQTKILEDADVSQDGVSYNTY 721

Query: 595 SPRQQLKLFTTYTFSGDWNKLQLGAGVNWQSRVYQTVNSPLGRVEVEQDSYALASLMTSY 654
            PR  L+++  Y  SG   ++ +GAGVN QS  Y+T  S      + Q  YA+ +    Y
Sbjct: 722 VPRHLLRVWGDYALSGPLERVTVGAGVNAQSSNYRT--SASSGKNITQAGYAVWNGRIGY 779

Query: 655 AFTEQLKLSANVHNALDKTYYSQVGQ--YSQFQYGTPRS--VSVNLDY 698
              +   ++ N +N  DK YY+ +G   +  F YG PR+  +SV  D+
Sbjct: 780 RIDDTWSVALNGNNLFDKRYYATIGSEGWGNF-YGEPRNFVMSVKADF 826