Pairwise Alignments

Query, 700 a.a., ferric alcaligin siderophore receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 806 a.a., TonB-dependent receptor from Pseudomonas sp. BP01

 Score =  342 bits (877), Expect = 4e-98
 Identities = 219/683 (32%), Positives = 352/683 (51%), Gaps = 34/683 (4%)

Query: 29  DLHDKRYKTPAMNTATGLDLSYLETPQSVTSVTRQMMQDQQLNSVIEAMTSVAGINARPM 88
           D   + Y+    ++ T L LS  ETPQ+V++VTR+ + D +LNSV +A+ +   +     
Sbjct: 147 DGQSRGYQARPASSTTRLGLSNRETPQAVSTVTREQLDDFKLNSVKDALRNAPTVTVEQF 206

Query: 89  DNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDNLIDTAIYERVEIVRGATGLMTGAGN 148
           + DR + +SRG  + +  YDG+   + +    GD   D A +E+++++ GA GLM+GAGN
Sbjct: 207 ETDRTAFTSRGFTIDNFEYDGMGMPFSSGVLLGDQ--DLAEFEQIDVLHGANGLMSGAGN 264

Query: 149 PSAAINLVRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLTDSGNIRGRVVAAYQDKESF 208
           PSA +N VRKRPT         S+G+W+N R   D+S  LTD GN+RGR++ A+    S+
Sbjct: 265 PSATVNFVRKRPTDTLQAKLGTSIGAWDNRRADFDVSGPLTDDGNVRGRLIYAHDKGNSY 324

Query: 209 QDRYQQQRTTLYGIVETDISDSTLLTLGADYQDTTPEATMSGGLPLFHSDGSRTNY-DRA 267
            DRY  +     G++  D+S +  LT+G   Q +    +  G LP+    G+  +Y  R+
Sbjct: 325 LDRYSHELNVTAGLLAFDLSSADTLTVGFSEQKSDANGSTWGALPMADYLGNPIHYSSRS 384

Query: 268 TSTAPDWA--SAHTQGLNSFASLEHRFDNGWELKGTYSYGDNSLEYNVLWATGYPDPVTN 325
           +S    W   + HTQ   +FA L H F  GW    T +  +   +  +L+A  +      
Sbjct: 385 SSIGQPWTYWNIHTQ--RAFAELAHDFGEGWRGTVTVTGVNQHQDTQMLYAIPF------ 436

Query: 326 LGATAGSI-AYID-GSRTQHNLDLRAQ--GMFALFGQEHQLTFGWTGQRQEFANPYYYPT 381
              TA  + AYI+  + T+H +   AQ  G FALFG++H+LT G    R       YY  
Sbjct: 437 ---TADDVLAYINRTTSTEHQVIGEAQLSGPFALFGRQHELTLGANYGRSRHDERGYYRN 493

Query: 382 AA---VPPLGDFRDPNFQYPKPQWKETHTTGSFGETEQSAAYVATQLNLTDALALLAGLR 438
           ++   V  LGD      Q P   + +   T  F +  Q + Y   + +LTD L  +AG R
Sbjct: 494 SSGSEVVSLGDALAGAVQKPPLTYTDELNTQHFTD-RQKSLYAGARFSLTDDLHWIAGAR 552

Query: 439 LNQWQTDQNNFGSLYDFNVDNELTTYLGLTYALTEQYSLYASYTDIFAPQTLQRIDASYI 498
           +     +   +GS +D  V  ++T Y GL Y L  Q+S+YAS+T+IF PQ L+      I
Sbjct: 553 MLSADGEGMGYGSAHDTRVHGKVTPYTGLVYDLNAQWSVYASWTEIFKPQYLRSTAGGVI 612

Query: 499 DPVKGKNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVLPGTTIPVYREVNGTQTQ 558
           +P++GK+ E G+K +L++E L +S ++F+  Q NV   TG+++ G     YR     ++ 
Sbjct: 613 EPLEGKSTEVGVKGNLLEERLTVSAALFKTEQQNVAVTTGEIIGGQY--AYRG-EDNKSH 669

Query: 559 GFEFESTGKITDDWNIYFGYTQFSTDDPKGNRINTTSPRQQLKLFTTYTFSGDWNKLQLG 618
           G E E++G+     ++  GYT    +D  G +     P   L+   TY       + ++G
Sbjct: 670 GVELEASGEAMPGLDLAAGYTYVHIEDGDGEKTRRYVPSHSLRGSVTYRLPA-LPQAKVG 728

Query: 619 AGVNWQSRVYQTVNSPLGRVEVEQDSYALASLMTSYAFTEQLKLSANVHNALDKTYYSQV 678
             V WQS          G  +V Q++YAL  LM S+ F E    S N++N  D+ Y   +
Sbjct: 729 TRVQWQS-----ATKADGNHQVRQEAYALMDLMGSFDFDEHWSASLNLNNVFDRKYLLSL 783

Query: 679 GQYS-QFQYGTPRSVSVNLDYRF 700
            Q +    YG PR+++ ++ +++
Sbjct: 784 YQSAGSTNYGAPRNLTASVTWKY 806