Pairwise Alignments

Query, 700 a.a., ferric alcaligin siderophore receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 820 a.a., TonB-dependent siderophore receptor from Pseudomonas fluorescens SBW25-INTG

 Score =  464 bits (1195), Expect = e-135
 Identities = 265/705 (37%), Positives = 389/705 (55%), Gaps = 44/705 (6%)

Query: 25  VGAKDLHDKRYKTPAMNTATGLDLSYLETPQSVTSVTRQMMQDQQLNSVIEAMTSVAGIN 84
           +GA       Y T +M +ATGL LS  ETPQSVT +TRQ M DQ  NS+ + +    G++
Sbjct: 131 LGATTEDTHAYTTGSMASATGLPLSMRETPQSVTVITRQQMDDQGTNSIADTLRRAPGVS 190

Query: 85  ARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDNLIDTAIYERVEIVRGATGLMT 144
            +  D++R+  SSRG+ +T+  YDGV +TYD  ++YG    D A+Y+ +EI++G+ GL++
Sbjct: 191 VQNYDSERWEFSSRGLPITNFQYDGVNSTYDGVYDYGTTSTDMAVYDHLEIIKGSAGLLS 250

Query: 145 GAGNPSAAINLVRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLTDSGNIRGRVVAAYQD 204
           G+G+PSA +NL+RK+PT  F  S + + GSW+N R   DLS  LT+SGN+RGR V  YQD
Sbjct: 251 GSGDPSATVNLIRKKPTPTFKASVTQTFGSWDNYRTEGDLSGPLTESGNVRGRFVGVYQD 310

Query: 205 KESFQDRYQQQRTTLYGIVETDISDSTLLTLGADYQDTTPEATMSGGLPLFHSDGSRTNY 264
           ++S+ D YQ  +   YGI+E D++  TLLT G D QDT        G P++ SDGSRT++
Sbjct: 311 RQSYLDHYQHTKDIAYGILEADLTSDTLLTFGIDQQDTRSRGASWTGFPMYFSDGSRTHF 370

Query: 265 DRATSTAPDWASAHTQGLNSFASLEHRFDNGWELKGTYSYGDNSLEYNVLWAT---GYPD 321
            R+ + A DW+         FAS++H   N W LK   S      +++ L A+   G PD
Sbjct: 371 SRSFNPAADWSRRDFNNQTLFASVQHTLANDWSLK--VSLDRKRSQHDTLLASASGGNPD 428

Query: 322 PVT--NLGATAGSIAYIDGSRTQHNLDLRAQGMFALFGQEHQLTFGWTGQRQEFANPYYY 379
           PV+  N+    G      G + Q+ LD+   G F+LFG+EH+L  G+   R +   P Y 
Sbjct: 429 PVSGENMYMFMGK---YKGDQVQNTLDINLSGPFSLFGREHELIMGFMATRSKQDVPVY- 484

Query: 380 PTAAVPPL-GDFRDPNFQYPKPQWKETHTTGSFGETEQSAAYVATQLNLTDALALLAGLR 438
             +  PP+ G   D + +Y KP    +          Q+ AY+AT+L  TD L+++ G R
Sbjct: 485 -GSIYPPVGGSIFDWHGEYAKPDIPRSGQNDIV--QRQTGAYLATRLKPTDDLSVILGTR 541

Query: 439 LNQWQ-TDQNNFGSLYD---------FNVDNELTTYLGLTYALTEQYSLYASYTDIFAPQ 488
           ++ +  TD  +F   YD         +     +T Y G+ Y L + +S+Y SYT I+ PQ
Sbjct: 542 VSTFSGTDSTDF---YDPAKPDNHTTYRQSGVVTPYAGIVYDLNDTWSVYTSYTQIYRPQ 598

Query: 489 TLQRIDASYIDPVKGKNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVLPGTTIPV 548
           + +  D   +DP++G  YEAG+KA+  D  L+ S++ F I QDNV E         T  V
Sbjct: 599 SSKDADRKLLDPIEGNTYEAGLKAAFYDGRLNASVAAFRIEQDNVAEYVSGF---ETDSV 655

Query: 549 YREVNGTQTQGFEFESTGKITDDWNIYFGYTQFSTDDPK-----GNRINTTSPRQQLKLF 603
           YR + G  T+GFE E +G++ D WN+  GYT   T D        + + TT+P+Q ++LF
Sbjct: 656 YRPIAGATTKGFEAELSGEVLDGWNLSAGYTYQHTRDANDGYVYSSVLQTTTPQQVVRLF 715

Query: 604 TTYTFSGDWNKLQLGAGVNWQSRVYQTVNSP-------LG-RVEVEQDSYALASLMTSYA 655
           +TY   G    + +G GVNWQS  +  V  P        G    + QDSY L  +M  Y 
Sbjct: 716 STYRLPGALENVTVGGGVNWQSEFFGNVFQPDPNDTVNFGHNARITQDSYYLVDVMARYR 775

Query: 656 FTEQLKLSANVHNALDKTYYSQVGQYSQFQYGTPRSVSVNLDYRF 700
             E L  + NV N  DK YY+ +G +    YG PRS+ +   + F
Sbjct: 776 VNEHLSTTLNVKNLFDKKYYTGLGNFGTGFYGEPRSLQLATRWDF 820