Pairwise Alignments

Query, 355 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 354 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  478 bits (1229), Expect = e-139
 Identities = 228/354 (64%), Positives = 283/354 (79%), Gaps = 1/354 (0%)

Query: 1   MSLSHQQKVYIPKEARTNQYITAEIKVTDELLNQYPDYHSCYQTLSRIIFNLAEQHDLRN 60
           MS +HQQKVY+P +ARTNQYITAEIK+TD LLNQYPD  SCYQ L++  F LAE+HDLRN
Sbjct: 1   MSFNHQQKVYLPTDARTNQYITAEIKLTDALLNQYPDVMSCYQALAKQFFELAERHDLRN 60

Query: 61  VHVITNDKLPVVRYHTEAYCFQTAEQILFFYNPAYHEAQNLFTADNYRARKLRIVFLATG 120
           VHVI NDKLPVVR+HTEAYC +T +Q++FFYNP YHEAQNLF   +YR RK+R +FLA G
Sbjct: 61  VHVIANDKLPVVRFHTEAYCLETDQQVIFFYNPRYHEAQNLFARADYRTRKIRFLFLAVG 120

Query: 121 DEIRSNSANFHTRVQEFLNELMPKLPIKDLKVKIRDHQHLSYDLFAKSKGNKETYGYKLR 180
           DE+R+NSA+FHT+VQ+ L EL P+L ++   +KIRDHQHL+YDLFA++KGNK+TYGYKLR
Sbjct: 121 DELRANSASFHTQVQQLLKELSPQLALEQ-PIKIRDHQHLTYDLFARAKGNKKTYGYKLR 179

Query: 181 AIAPRYKARKCELPENVSSLTYVTVSLPLSRKLKQGLLPESATDFSPLYQHLEDNFLKAA 240
            I  RYKARKCELP +VS+L+Y TV+LPL R+LKQ L  E  +++  +Y  L+D+F KA 
Sbjct: 180 GIPQRYKARKCELPADVSALSYATVTLPLGRRLKQRLGGEHPSNYGDIYAKLQDSFQKAV 239

Query: 241 ANKQLTRLAMIANGLTPLVRNSKFEKLDSKAEVQMIGFDPNATEQQVIRRWDADNLVEAA 300
            +    R AM+ANGL PLVRNSKF++L+S   VQM+GFDPNA+E Q +  W  DNLVE A
Sbjct: 240 LDHGFKRAAMVANGLLPLVRNSKFDRLESNKGVQMLGFDPNASEPQFLAHWQPDNLVETA 299

Query: 301 HFTIVAGAKDCDDAGYGRFMNNVEAALKSFAAEIGLDPEREDLVTRFHQHISYQ 354
           +F I AG++D  DAG+GRFMN VE AL+ FA +I LD ER+DLV RFHQHISY+
Sbjct: 300 YFVIAAGSEDHTDAGFGRFMNEVEDALRQFARDIDLDGERQDLVIRFHQHISYK 353