Pairwise Alignments

Query, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  344 bits (882), Expect = 1e-99
 Identities = 178/224 (79%), Positives = 194/224 (86%)

Query: 5   VSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALD 64
           +SK  AI VV+L+K V TQEG LTILKG++++VK GESVAI+GPSGSGKSTLLGLLAALD
Sbjct: 1   MSKMHAIKVVHLKKKVQTQEGELTILKGVDMEVKPGESVAIIGPSGSGKSTLLGLLAALD 60

Query: 65  TPTAGEIWLDGEALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGVKN 124
           TP+ GEIWLDG ALS L EE KAALRK+K+SFIFQSFMLVDTLTALENVMLPAELAG+K+
Sbjct: 61  TPSEGEIWLDGSALSNLGEEAKAALRKKKISFIFQSFMLVDTLTALENVMLPAELAGMKD 120

Query: 125 AKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDSVNG 184
           AK KAEAML RVGLSHR+ HLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLD  N 
Sbjct: 121 AKAKAEAMLERVGLSHRVNHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDGGNA 180

Query: 185 HKIADMLFELNQENHTTLILVTHDLQLAKRCQRQLVMDNGHLQE 228
           HK+ADMLF LN E  TTL+LVTHD QLA RCQRQ  M  G L E
Sbjct: 181 HKVADMLFALNAELGTTLVLVTHDNQLALRCQRQFTMTEGELAE 224