Pairwise Alignments

Query, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., lipoprotein releasing system ATP-binding protein LolD (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (494), Expect = 1e-54
 Identities = 108/220 (49%), Positives = 152/220 (69%), Gaps = 6/220 (2%)

Query: 11  INVVNLEKSVTTQEGSLT--ILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTA 68
           + V N+ K  T +EG L   +L G++L V +GE +AI+G SGSGKSTLL ++ +LD PT+
Sbjct: 6   LKVENVSK--TYREGKLETQVLCGVDLSVYRGEQLAIVGGSGSGKSTLLHIMGSLDKPTS 63

Query: 69  GEIWLDGEALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGV--KNAK 126
           G++ L+GE L  L+  ++A +R   + FI+Q   L+   +ALENV +PA +AGV  K A 
Sbjct: 64  GKVLLEGEDLYSLSAARQAQIRNASLGFIYQFHHLLPEFSALENVAMPARIAGVDKKTAF 123

Query: 127 EKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDSVNGHK 186
            +AEA+L RVGLSHRL+H P +LSGGE+QRVAIARA I +P+++ ADEPTGNLD+ +G  
Sbjct: 124 GRAEALLERVGLSHRLSHAPSELSGGERQRVAIARALINQPRLVLADEPTGNLDAASGEA 183

Query: 187 IADMLFELNQENHTTLILVTHDLQLAKRCQRQLVMDNGHL 226
           +  ++ EL  +  T  ++VTHD  LA R  RQL M +G L
Sbjct: 184 VYALIRELAAQLGTAFVVVTHDNALAARMDRQLSMKSGKL 223