Pairwise Alignments

Query, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  441 bits (1135), Expect = e-129
 Identities = 233/253 (92%), Positives = 243/253 (96%), Gaps = 4/253 (1%)

Query: 1   MSNVVSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLL 60
           MSNVVSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLL
Sbjct: 1   MSNVVSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLL 60

Query: 61  AALDTPTAGEIWLDGEALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELA 120
           AALDTPT+GEIWLDG+ALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELA
Sbjct: 61  AALDTPTSGEIWLDGQALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELA 120

Query: 121 GVKNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLD 180
           GVKNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLD
Sbjct: 121 GVKNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLD 180

Query: 181 SVNGHKIADMLFELNQENHTTLILVTHDLQLAKRCQRQLVMDNGHLQENEHPNALQSNSA 240
           SVNGHKIADMLFELNQE+HTTLILVTHDLQLAKRCQRQLVMDNGHLQ  E  ++ QS+S 
Sbjct: 181 SVNGHKIADMLFELNQESHTTLILVTHDLQLAKRCQRQLVMDNGHLQ--EELDSAQSHSV 238

Query: 241 CESNSITASAKEA 253
             ++++  SAKEA
Sbjct: 239 --NDNLELSAKEA 249