Pairwise Alignments

Query, 220 a.a., signal peptidase I family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 261 a.a., signal peptidase I (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  114 bits (285), Expect = 2e-30
 Identities = 81/214 (37%), Positives = 110/214 (51%), Gaps = 36/214 (16%)

Query: 24  VFRSAVADWNTVPTGSMLPTIVEGDRILVNKMAY---DVRVPFTHIAL---VKLADPVRG 77
           VFR+       +P+GSM  T++ GD + VNKMAY    V  PF+   +   +  +DP RG
Sbjct: 27  VFRTLFFQPFWIPSGSMKDTLLVGDFLFVNKMAYGYSQVSCPFSMCPIPGRIFASDPERG 86

Query: 78  DIVVFDSKNADKRLIKRVIAVPGDTVMMRDNRLYLNGEPLAYKPQ--------------- 122
           DIVVF         IKR+I +PGDTV  RD RL LNGE +  +P                
Sbjct: 87  DIVVFRHPVNGSDFIKRLIGLPGDTVQFRDGRLILNGEAVPTEPDGTFDEIFERQGPIGS 146

Query: 123 ----ALSPYAPAGVVEMQEDLL----GIMHSIRLNQLPSKLANFGPVTVPDEHYLALGDN 174
               A +P    GV E ++ +     G+ HSI LN   S   N    TVP+ H+  +GDN
Sbjct: 147 FPRCANAPVGQGGVCEKEKFVETLPGGVSHSI-LNIDQSFGDNTPEFTVPEGHFFFVGDN 205

Query: 175 RDNSADSRV------IGFVPRDEIVGRSSSLVFS 202
           RDNS DSR       +GFVP + ++GR+  ++FS
Sbjct: 206 RDNSQDSRYAQSVGGVGFVPFENLIGRADRVIFS 239