Pairwise Alignments

Query, 296 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., epimerase from Vibrio cholerae E7946 ATCC 55056

 Score =  268 bits (685), Expect = 1e-76
 Identities = 149/303 (49%), Positives = 194/303 (64%), Gaps = 8/303 (2%)

Query: 1   MKILITGASGFIGQQLVAHLANQHELLLLTRHPGSIRQ----LLGPQHQYLSSLDEIDDL 56
           M+ILITG +GF+G +L+  L + HELL+LTR      Q    +     Q L SLDE+ D 
Sbjct: 1   MRILITGGTGFVGFELIK-LLSSHELLVLTRDLTKAAQRFAHIPSQNLQLLRSLDELSDF 59

Query: 57  NHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNPPQVMISGSAIGF 116
           N I+A+INLAGEPI  KRWS  QKQ I  SR +IT +L + I  S +PP V +SGSA+GF
Sbjct: 60  NGIDAIINLAGEPIADKRWSKSQKQRIARSRLDITEQLVEKIHASAHPPAVFLSGSAVGF 119

Query: 117 YGRQGAIPIDEHAVPHSE-FSHDICKEWERLALKATSK-TRVCILRTGIVLG-HGGALAK 173
           YG Q     DE     S+ FSH +C++WE+ ALKA S+ TRVC+LRTGIVL   GGAL K
Sbjct: 120 YGDQQQHAFDESLQVRSDHFSHQVCQQWEQRALKAQSEQTRVCLLRTGIVLAPEGGALKK 179

Query: 174 MLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNTEFSK 233
           MLPP++LG+GGPIG G+Q M WIHM DMV  I FLL  +   G +N  AP+PV+N EFS 
Sbjct: 180 MLPPYRLGLGGPIGDGQQYMPWIHMQDMVRAILFLLETEHAQGPYNLCAPHPVTNAEFSL 239

Query: 234 TLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPALKDL 293
           TL   L RP    TP  ++++ +GE ++LL +     PK   D GF F + +++ A   L
Sbjct: 240 TLATTLKRPHLFKTPQWLIKMLLGEASELLLDSIRAKPKKLTDLGFQFHYSRIDRAFNQL 299

Query: 294 LAS 296
           L +
Sbjct: 300 LTA 302