Pairwise Alignments

Query, 296 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  309 bits (791), Expect = 6e-89
 Identities = 157/306 (51%), Positives = 205/306 (66%), Gaps = 10/306 (3%)

Query: 1   MKILITGASGFIGQQLVAHLANQHELLLLTRHPGSIRQLLGPQHQYLSSLDEIDDLNHIN 60
           M+ILITG +GFIG+ LV  L  +H+L LLTR  G     LG QH+ L +L  + +L+  +
Sbjct: 1   MRILITGGTGFIGKALVKALEGEHQLTLLTRSAGKAHLTLGNQHKLLGNLSALANLDGFD 60

Query: 61  AVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNPPQVMISGSAIGFYG-R 119
           AVINLAGEPI  KRWS + KQ ICDSRW+ TARL++L   S  PP+V ISGSAIG YG  
Sbjct: 61  AVINLAGEPIADKRWSLEVKQKICDSRWDTTARLAKLFEASKTPPKVFISGSAIGIYGDH 120

Query: 120 QGAIPIDEH--------AVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLG-HGGA 170
              + +DE              +F H +C +WE LAL+    TRVC++R G+VLG +GGA
Sbjct: 121 DKQVHLDESFDLAHFKDTGKEEKFPHSVCAKWEELALQCQGLTRVCVMRIGLVLGLNGGA 180

Query: 171 LAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNTE 230
           L KML PFKLG GG +G G+QGMSWIH  D++A+I FLL +++C GI+NATAP PVSN E
Sbjct: 181 LKKMLLPFKLGAGGVVGSGKQGMSWIHREDLIAIILFLLNNEQCQGIYNATAPNPVSNRE 240

Query: 231 FSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPAL 290
           F+ +LG  L+RP  +  P P+L LA+GEM+ LL EGQ+V P     AGF+F +  L+ AL
Sbjct: 241 FTNSLGTALSRPTLLPMPAPILSLALGEMSQLLLEGQYVYPDRLTQAGFSFHYTHLDDAL 300

Query: 291 KDLLAS 296
            +L  +
Sbjct: 301 TNLFGA 306