Pairwise Alignments

Query, 296 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., domain of unknown function DUF1731 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  174 bits (440), Expect = 3e-48
 Identities = 116/318 (36%), Positives = 163/318 (51%), Gaps = 24/318 (7%)

Query: 1   MKILITGASGFIGQQLVAHLANQHELLLLTRHPGSIRQLLGPQHQYLSSLDEIDDLNHI- 59
           M ++I G +GFIG  L   L  + + + +           G  H   +  D  + L+ + 
Sbjct: 1   MHVVILGGTGFIGSALARALLARGDTVTVPSRAPRPAPAQGVVHAAWNGRDP-ESLSRLL 59

Query: 60  ---NAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNN----------PPQ 106
               AV+NL GE I   RW+ Q+K  I DSR      ++  +   N           PP 
Sbjct: 60  EGTQAVVNLLGENIAGGRWTPQRKARIVDSRVAAGQAVAAALGAMNGAGLPAVPPTVPPT 119

Query: 107 VMISGSAIGFYG---RQGAIPI-DEHAVPHSEFSHDICKEWERLALKATSK-TRVCILRT 161
           V++  SA+G+YG      + P+  E   P + F  + C  WE  +  A +   R CI+R+
Sbjct: 120 VLVQASAVGYYGVWPDMASAPLCAEGDPPGTGFLAETCARWEASSAPAQAMGVRRCIIRS 179

Query: 162 GIVLGHGGALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNAT 221
           G+VLG GGALA+MLP F+  +GGP+G GRQ   WIH+ D V  I  LL    C G +N +
Sbjct: 180 GVVLGAGGALARMLPAFRAWLGGPLGSGRQPFPWIHLADEVGAILHLLDTPSCSGPYNLS 239

Query: 222 APYPVSNTEFSKTLGKVLNRPAFM-TTPVP--VLRLAMGEMA-DLLTEGQFVLPKHALDA 277
           AP  V N  F+  L + + RPA++   PVP   LRLA+GE+A + L  GQ   P    D+
Sbjct: 240 APQAVDNAGFTAELNRAVGRPAWLPAPPVPAFALRLALGELAEEALLAGQVTPPGRLADS 299

Query: 278 GFTFRFEQLEPALKDLLA 295
           G+TFRF  L  AL DLLA
Sbjct: 300 GYTFRFPALRAALADLLA 317