Pairwise Alignments

Query, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., Predicted SAM-dependent methyltransferases from Pseudomonas stutzeri RCH2

 Score =  103 bits (256), Expect = 7e-27
 Identities = 93/320 (29%), Positives = 143/320 (44%), Gaps = 39/320 (12%)

Query: 14  GEDAVRLFHGRGGHYAGCEHLCLDWFAPVLLLTSFIQLEEAELADCQQAITARWQALQPN 73
           G D  RLFHG     AG   L +D + P L++ SF Q  +A     +    A  + L   
Sbjct: 26  GTDCYRLFHGSQEGAAG---LTVDRYGPQLMVQSFHQPVDA--LSLESIRNAACEFL--G 78

Query: 74  RPLNLVYQYRCGGET-FSQLLTGEVP-----EQHIVTENRAKFQVHLLR-GQNHGLFLDM 126
            PL  VY  R    +   +  TG  P     E  +  E   +++V     GQ+  LFLD+
Sbjct: 79  EPLQFVYNDRSQSNSRIDRSATGHQPDDAALEDQVGHEWGLRYRVRARHSGQDPLLFLDL 138

Query: 127 ANGREWVRANARHKKILNLFAYTCGFSVAALQGGADEVVNMDMSKGALAIGKQNHLLNDF 186
            N R WV+ ++  K +LNLF+YTCG  + A  GGA E+ N+D ++  LA+G++N  LN  
Sbjct: 139 RNARGWVKQHSAGKSVLNLFSYTCGVGLCAAAGGAAEIWNVDFAERNLAVGRENGELNPS 198

Query: 187 TAGARFLGHDIFKSWGKLRKL------------------GPYDIVVADPPSNQKGSFVAT 228
                F+  D F +  +L  L                    +D+V+ DPP+  + +F   
Sbjct: 199 LPPMHFVHSDYFPAIRQLAGLPVSARRGRTLPAYPRLAQRQFDLVLLDPPAWARSAFGTV 258

Query: 229 ---KDYVRLIRHLPELLAENAEVLLCLNAPELDTQFLRQQV----EEAAPALEYLERLPN 281
              +DY  L++      AE+  ++ C N  ++  +  R QV    E+A   +   + L  
Sbjct: 259 DLLRDYQSLLKPALLATAEDGVLICCNNLAKVSMEDWRTQVLRCAEKAGRPVREWQVLAP 318

Query: 282 PAAFADVSQEKSLKVLRYRL 301
            A F  +     LK L  RL
Sbjct: 319 AADFPSLDGLAPLKTLILRL 338