Pairwise Alignments

Query, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 312 a.a., Predicted SAM-dependent methyltransferases from Pseudomonas stutzeri RCH2

 Score =  270 bits (689), Expect = 4e-77
 Identities = 142/301 (47%), Positives = 194/301 (64%), Gaps = 11/301 (3%)

Query: 5   IDALATIEVGEDAVRLFHGRGGHYAGCEHLCLDWFAPVLLLTSFIQLEEAELADCQQAIT 64
           +DALA +   ++  RLFHGRG  Y G E L +DW   V+L+  F    EAE A  +Q + 
Sbjct: 14  LDALANVP--DETRRLFHGRGRCYPGLEQLTVDWLQGVVLVALFRDPGEAERAALRQMLM 71

Query: 65  A-----RWQALQPNRPLNLVYQYRCGGETFSQLLTGEVPEQHIVTENRAKFQVHLLRGQN 119
           A      WQ  Q  R   L+ Q+R   +  ++ L G+VP +  ++EN   +++ L R QN
Sbjct: 72  ALTESPAWQQSQAQR---LLLQHRYLPDAPTEALLGDVPAEWQISENGLHYKLDLGRKQN 128

Query: 120 HGLFLDMANGREWVRANARHKKILNLFAYTCGFSVAALQGGADEVVNMDMSKGALAIGKQ 179
           +GLFLDM  GR WV+ +A+ K++LNLFAYTCGFSVAA+ GGA+ VVN+DM+  AL  G++
Sbjct: 129 NGLFLDMRYGRRWVQKHAQGKRVLNLFAYTCGFSVAAIAGGAEHVVNLDMASAALTRGRE 188

Query: 180 NHLLNDFTAG-ARFLGHDIFKSWGKLRKLGPYDIVVADPPSNQKGSFVATKDYVRLIRHL 238
           NH LN    G   FLGH++FKSWGK+RKLGPYD+++ DPPS QKGSF  T+DY +++R L
Sbjct: 189 NHRLNGHDLGRVSFLGHELFKSWGKVRKLGPYDLIIIDPPSFQKGSFALTRDYQKILRKL 248

Query: 239 PELLAENAEVLLCLNAPELDTQFLRQQVEEAAPALEYLERLPNPAAFADVSQEKSLKVLR 298
           PELL    +VL C+N P++   FL Q +   AP L + +RL NP  F D+S E  LK L 
Sbjct: 249 PELLNAGGQVLACVNDPDIGANFLIQGMAAEAPQLRFEQRLDNPPEFPDISPESGLKALL 308

Query: 299 Y 299
           +
Sbjct: 309 F 309