Pairwise Alignments

Query, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  402 bits (1032), Expect = e-117
 Identities = 193/300 (64%), Positives = 230/300 (76%)

Query: 1   MQGFIDALATIEVGEDAVRLFHGRGGHYAGCEHLCLDWFAPVLLLTSFIQLEEAELADCQ 60
           MQ FID LAT E+ +D  RLFHGRGG Y G EHLCLDW+AP LLLTSF +L   ELA  +
Sbjct: 1   MQAFIDFLATAELPQDCRRLFHGRGGRYPGAEHLCLDWYAPALLLTSFCELSADELATAK 60

Query: 61  QAITARWQALQPNRPLNLVYQYRCGGETFSQLLTGEVPEQHIVTENRAKFQVHLLRGQNH 120
            A+   WQ +    PL LVYQYR G  T ++ L GE+P+ H++ E   KF VHL+RGQNH
Sbjct: 61  AALETFWQRVGKAAPLILVYQYRSGAGTRTECLCGELPDSHVIEEQGLKFLVHLMRGQNH 120

Query: 121 GLFLDMANGREWVRANARHKKILNLFAYTCGFSVAALQGGADEVVNMDMSKGALAIGKQN 180
           GLFLDM  GR +V  +AR KK+LNLF+YTC FSVAAL GGA EVVN+DM+KGAL+IGKQN
Sbjct: 121 GLFLDMREGRRFVHEHARGKKVLNLFSYTCAFSVAALAGGATEVVNIDMAKGALSIGKQN 180

Query: 181 HLLNDFTAGARFLGHDIFKSWGKLRKLGPYDIVVADPPSNQKGSFVATKDYVRLIRHLPE 240
           H LN    GARFLGHDIF SWGKL + GPYD+V+ADPPSNQKGSF+ATKDYVRL+R LPE
Sbjct: 181 HDLNGLVGGARFLGHDIFSSWGKLTRYGPYDLVIADPPSNQKGSFIATKDYVRLLRRLPE 240

Query: 241 LLAENAEVLLCLNAPELDTQFLRQQVEEAAPALEYLERLPNPAAFADVSQEKSLKVLRYR 300
           L+ E  ++LLCLNAPEL + FL  QV+E AP+L ++ R+ NPA +ADV +EKSLKVL YR
Sbjct: 241 LVKEGGDLLLCLNAPELGSNFLMSQVDETAPSLAFVTRIANPAVYADVDEEKSLKVLHYR 300