Pairwise Alignments

Query, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 713 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 81.3 bits (199), Expect = 6e-20
 Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 10/161 (6%)

Query: 102 IVTENRAKFQVHLLRGQNHGLFLDMANGREWVRANARHKKILNLFAYTCGFSVAALQGGA 161
           I TE  AKF+++L    + GLFLD    R  V   ++ +++LNLF+YT   SV A  GGA
Sbjct: 509 ITTEYGAKFKLNLTGYLDTGLFLDHRLTRRLVGQKSKGRRVLNLFSYTGSASVHAALGGA 568

Query: 162 DEVVNMDMSKGALAIGKQNHLLNDFTAGA-RFLGHDIFKSW---GKLRKLGPYDIVVADP 217
             V  +DMS   LA  K+N  LND +     F+  D  + W       K   YD++  DP
Sbjct: 569 KSVTTVDMSNTYLAWAKENFALNDLSGKQYEFVQADCLQ-WIRDSAHDKSAQYDLIFIDP 627

Query: 218 P--SNQK---GSFVATKDYVRLIRHLPELLAENAEVLLCLN 253
           P  SN K    SF   +D+V L+  L +LL+ N E++   N
Sbjct: 628 PTFSNSKRMEDSFDVQRDHVNLLGMLIKLLSPNGEIVFSNN 668