Pairwise Alignments

Query, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 984 a.a., TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins from Xanthomonas campestris pv. campestris strain 8004

 Score =  236 bits (603), Expect = 4e-66
 Identities = 256/965 (26%), Positives = 405/965 (41%), Gaps = 117/965 (12%)

Query: 16  IGGATTAALSTMSVFAAEDDNAKVERIEVTGSRIQRTDMESALPVTVLSAEDIAKTGLSD 75
           +G A   A +  +   +    + ++ + VTGSRI+R  +E A PV  +SA+ I + G + 
Sbjct: 41  LGAAVQPASAQQTDADSPRATSTLDAVSVTGSRIKRAQVEGAQPVVTISAQQIQQEGFAT 100

Query: 76  VSAVLAQMPFNTAGSFISDA--GSSASNHASSGMRGLGSNRTLTLINGRRIAP-SATFGG 132
           V  VL  M  N  GS  +D   GS   N +   +R LG  RTL L+NGRR+A     +GG
Sbjct: 101 VYDVLNSM--NQQGSVEADTQWGSHTPNASPINLRDLGPGRTLLLVNGRRVADYPLPYGG 158

Query: 133 DA--TNLNLIPMDAIERIEILRDGASAIYGSDAIGGVINIILKKTFDGLAFDAKFGNPTQ 190
           ++  +N + IP  A+ERIEIL  GASAIYGSDA+ GV+N+ILK+ + G     + G  T+
Sbjct: 159 ESNFSNYSNIPSAAVERIEILTGGASAIYGSDAVAGVVNVILKRDYQGDQVRLRGGTATE 218

Query: 191 GGRDEKSASVTFGNTSDKSSSLVIIEHKQFDPLEGGQRPHLTANWDEKY----GRSALYA 246
           GGRD    S   G T +  S    ++  + DPL G  R  +  + D  Y    G++ LY 
Sbjct: 219 GGRDSFDVSWAGGRTGENWSLTYALQATRRDPLSGRDRAQMDDSDDMSYSNWTGQNRLYG 278

Query: 247 PEGTYRPVASRPIKGADGT--FSDPVYTGLQVPGKDCPADRI-------VTSKAGSACGF 297
               + P     +  A+     + P  T  +  G+   A R+         + AG  CG 
Sbjct: 279 ----FNPFTGLSLVDANTNERLAPPAGTCARFGGEFVDASRLSYNQNNGALTNAGDYCGM 334

Query: 298 NHFDGTDY-LPDQTKD-SVFSNMTYRITDELEWFGQAIVMRDKSITSSTALWTPNLYIAA 355
              D  D+ L   ++D S +   T+R  +  E +         S   S   WT N   A 
Sbjct: 335 AR-DYADWGLVTGSEDYSAYLYGTWRFGEHTEAWATF------SANRSIGRWTYNPPYAY 387

Query: 356 DNPL-NPTFGTANASEVQAYHRLKGVADRTTEFDSNVV-DVVTGLNLELDAGSLSWYVQY 413
             P  +   G +  +  Q   R  G  DR   ++     D+  GL   + A    W +  
Sbjct: 388 LGPFQDADTGRSLYAIRQMTRREAGGWDRLANYNKEQSWDLSAGLR-GVWADRFDWELSV 446

Query: 414 SDQIVNIETDSYVFEDKLQEAVDKGLYNPFVEGGNATQATLDTFLHTATRKATSNTT--- 470
                 +  D YV       A D  L +P    G A   +    ++TA   A  ++    
Sbjct: 447 GRSRYTV--DEYVRTVDTARATDYFLGSPL---GTAADGSAIYAVNTARWYAPLSSEQYD 501

Query: 471 -------GTGLSWAALAPISLPG-------GDLGYAVGMEYQKIEYKDTRDAQQAAGNVL 516
                   +  SW   A  SL G       G + +A   E  K  Y+ + D    A   +
Sbjct: 502 SLVVKSHNSAYSWVNQAAFSLSGDLFQGWAGPIRFATVAEVAKQGYQLSPDPCANACYPV 561

Query: 517 GTYGGDSAGDRSYKAAFVELELPVLDHLNVKLASRYDQYS-------LPDVGQLSN---S 566
                   G+R   +A +EL++P+L  L+  +A RYD+Y          +VG  S+   S
Sbjct: 562 DVV-DSGGGERLRSSAGLELQIPLLSTLSANIAGRYDRYGNYRSSAVQTEVGTQSDTTWS 620

Query: 567 VNVRYEALDNLVLRASYGQGFRAPSLDDLLGEPATSYDYVTDTTLCQSLPADQQKGNPAC 626
             + +  +D+L+ R++    FRAP +  +LGEP+++   V D   C S  A    G+   
Sbjct: 621 AGLEWRPIDSLLFRSTLATSFRAPDMHYVLGEPSSTNQTVIDQYRCISSGA-YLTGSCND 679

Query: 627 EDTQYLR----KSSGNKELEPEKSAQYSFGAVWNITENIDFVVDYYNIEITDQVSYIDAQ 682
           E++           G  +L  E    ++ G VW+I + +   VDYY I++ + +  +D  
Sbjct: 680 ENSNIYYTVDVNRRGTPDLRSETGRSFTGGVVWDIAQGLSLSVDYYRIQLEEMIKDLDRD 739

Query: 683 TIVDLEA---------------IGGLGAYDPNYIYVKRKADGTIDEIGAGNINMDGVQTS 727
            I+  EA                GG G  D     V R ADGTI  I  G IN+  ++TS
Sbjct: 740 EILSAEAGCRTGTTVSGGAWNNPGGAGYCDTITSRVLRNADGTIASIERGPINLAQMETS 799

Query: 728 GLDVSFTSNFDLADLGTFKFAVEGTYALEYTEQA----SPIAKRYDVLGTKGYPPLRFNT 783
           G+D S       A  G F+ +++    + Y EQ     S   +R + + ++    + ++ 
Sbjct: 800 GIDASLKYRLSTAGWGNFQLSLDYNTLIAYREQIYRTDSDENRRDERVRSRVRGSVHWDN 859

Query: 784 TFSY----------AIDDFSTSLIAKYIDSYDGETPQQQEV---------GTNKQDFSSF 824
             ++          ++   +    A++ D Y      +  V          T+K+ F   
Sbjct: 860 GGAWDWTVYFRRLGSMRAVNWGTCARFDDGYQPSAADECLVTDTANVHLGETSKRYFGRV 919

Query: 825 ---TTWDLTFNYDFNSYGNVTVGARNLFDAMPAVNYS--LGYPGYDTDTHNILGRVVFAG 879
                W+L+  Y    +  V     N+F+ +   N     GY  Y+T   N +GR V A 
Sbjct: 920 GPAIYWNLSTGYKITDHAKVNFYVNNVFNEVGYENKERFYGYGFYNTTLFNPIGREVAAE 979

Query: 880 YKVKF 884
           Y   F
Sbjct: 980 YVFTF 984