Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 528 a.a., sodium/proton antiporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  901 bits (2329), Expect = 0.0
 Identities = 460/532 (86%), Positives = 494/532 (92%), Gaps = 6/532 (1%)

Query: 1   MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMAL 60
           MP+T+ Q+   NFLGNSP+WYK AILSFL INPILF Y++PF+AGWVLV++FIFTLAMAL
Sbjct: 1   MPLTLGQSLFANFLGNSPRWYKFAILSFLAINPILF-YLNPFIAGWVLVIQFIFTLAMAL 59

Query: 61  KCYPLQPGGLLAIEAVAIGMTSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFAFTK 120
           KCYPLQPGGLLAIEAV IGMTS +QVLHEI+ANLEVLLLLVFMVAGIYFMKQLLL+AFTK
Sbjct: 60  KCYPLQPGGLLAIEAVIIGMTSPTQVLHEIQANLEVLLLLVFMVAGIYFMKQLLLYAFTK 119

Query: 121 MITKVRSKILVSLLFCLASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSADHD 180
           M+TKVRSKI+VS+LFC+ASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFS+DHD
Sbjct: 120 MLTKVRSKIVVSMLFCIASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSSDHD 179

Query: 181 HTSENKNEEGEDQLNEAELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW 240
           HTSE       +QLNE+ELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW
Sbjct: 180 HTSE-----APEQLNESELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW 234

Query: 241 QFGEFAIRMSPVTVPVFIAGILTCYIVEKFRIFGYGAQLPDAVHKILCDYDAHEDARRTN 300
           QFGEFAIRMSPVTVPVF AGILTC+IVEKF+ FGYGA+LP+AVHKIL +YDA+EDARRT 
Sbjct: 235 QFGEFAIRMSPVTVPVFFAGILTCFIVEKFKWFGYGAKLPEAVHKILSEYDAYEDARRTP 294

Query: 301 KDKMKLIVQAFIGVWLIAGLALHLASVGLIGLSVIILATAFNGITDEHALGKAFEEALPF 360
           KDK+KLIVQA +GVWLI GLA HLASVGLIGLSVIIL TAFNGITDEHALGKAFEEALPF
Sbjct: 295 KDKVKLIVQALVGVWLIVGLAFHLASVGLIGLSVIILNTAFNGITDEHALGKAFEEALPF 354

Query: 361 TALLAVFFSVVAVIIDQQLFAPVIQWALNHEGNTQLVIFYIANGLLSMVSDNVFVGTVYI 420
           TALLAVFF+VV VIIDQQLFAPVIQWAL++EGN QLVIFYIANGLLSMVSDNVFVGTVYI
Sbjct: 355 TALLAVFFAVVGVIIDQQLFAPVIQWALSYEGNVQLVIFYIANGLLSMVSDNVFVGTVYI 414

Query: 421 NEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR 480
           NEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR
Sbjct: 415 NEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR 474

Query: 481 MVWMALPYTIVLSIVGVMAIQIGFLEQMTQYFYDSHAILHHSVKEALAPATG 532
           MV MALPYTIVLSIVG++AI+ GFL  MTQYFYDSH I HH+  EA   A G
Sbjct: 475 MVMMALPYTIVLSIVGILAIESGFLTDMTQYFYDSHLINHHTAAEAAGKALG 526