Pairwise Alignments

Query, 240 a.a., fatty acid metabolism regulator protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 279 a.a., fatty acid metabolism transcriptional regulator FadR from Vibrio cholerae E7946 ATCC 55056

 Score =  253 bits (645), Expect = 4e-72
 Identities = 134/278 (48%), Positives = 176/278 (63%), Gaps = 40/278 (14%)

Query: 1   MIINAKGPASFAEKYIVRSIWENKFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW 60
           M+I AK PA FAEKYI+ SIW  +FPPGSILPAERELSELIGVTRTTLREVLQRLARDGW
Sbjct: 1   MVIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW 60

Query: 61  LKIQHGKPTRVNNFWETSGLNILETIADLNPEGFPVLVDQLLSARTNVSAIYFRGALRNN 120
           L IQHGKPT+VN F ETSGL+IL+T+  L+ E    +V+ LL+ARTN+S I+ R A + N
Sbjct: 61  LTIQHGKPTKVNQFMETSGLHILDTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLN 120

Query: 121 PDTAMEVLAQI----------------------------HQLEDT------------AES 140
            ++A  ++  +                            H  ED+            A++
Sbjct: 121 KESAERIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKDELKRQEILIAKT 180

Query: 141 FAEYDYLLHHTLAFSSGNPLYVLILNGFKGLYSRVGRYYFSSSEARQLALNFYKELELLA 200
           F  YDY+L   LAF SGN +Y LI NG K LY RVG YYFS+ +AR+LA+ FY++L  + 
Sbjct: 181 FNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAMEFYRQLLAVC 240

Query: 201 KAKNYLDVPALMRTYGINSGKMWLQLRDDMPSSIAQQD 238
           ++     +P ++R YGI SG +W Q++  +PS+  + D
Sbjct: 241 QSGEREHLPQVIRQYGIASGHIWNQMKMTLPSNFTEDD 278