Pairwise Alignments

Query, 240 a.a., fatty acid metabolism regulator protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 260 a.a., GntR domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 11/158 (6%)

Query: 28  GSILPAERELSELIGVTRTTLREVLQRLARDGWLKIQHGKPTRVNNFWETSGLNILETIA 87
           G+ LPAER+L+E +GV+R  LRE L+RL  +G L+ + G+ + V     T+    L  + 
Sbjct: 36  GARLPAERDLAEALGVSRPKLREALKRLEDEGLLETRKGEGSFVAQLTNTAMSPALLDLF 95

Query: 88  DLNPEGFPVLVDQLLSARTNVSAIYFRGALRNNPDTAMEVLAQ------IHQLEDTAESF 141
             + E F     + L  R    A   R A   + D   + ++Q      I Q  D A + 
Sbjct: 96  SRHGEAF----FEYLEYRKEQEAFAARLAAERHTDFDAQAISQHLANMRIAQDRDDARAS 151

Query: 142 AEYDYLLHHTLAFSSGNPLYVLILNGFKGLYSRVGRYY 179
            E D   H  +  +S N +   +++    L +R G +Y
Sbjct: 152 MESDIAFHSAIVDASHNTMLSHMMSSIYEL-TRRGVFY 188