Pairwise Alignments

Query, 422 a.a., yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Shewanella oneidensis MR-1

Subject, 423 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  457 bits (1175), Expect = e-133
 Identities = 227/417 (54%), Positives = 297/417 (71%), Gaps = 2/417 (0%)

Query: 5   IDRRLNAKGKSTVNRQRFINRYKQQIKKAVSDAVTRRSVTDVDKGEKISIPTRDISEPMF 64
           IDRRL  K KS  NR+RF+ R K  I++AVS+AV  RS+ D+   + I+IP +DI+EP F
Sbjct: 6   IDRRLAGKNKSIANRERFLRRVKNYIRRAVSEAVRDRSIKDIQNTQSITIPRKDIAEPSF 65

Query: 65  HQGKGGVRDRVHPGNDQFTRGDKIDRPQGGSGGGAGKGDASDSGEGNDDFVFEISKDEYL 124
             G GG R+ VHPGN  + RGDKI RPQGG GGG G   AS+ GEG DDFVFE+S++E++
Sbjct: 66  RHGPGGKREMVHPGNSDYIRGDKIQRPQGGGGGGGGN-QASNEGEGQDDFVFELSREEFM 124

Query: 125 ELLFEDLELPNLQKNRLNKLVEYQIYRAGFTNDGVPANINIVRSLRSSLARRIAMSASKK 184
           +  F+DLELP L K  L  +  ++  RAG+  +G P NI++VRSLRS+L RRIA+ A   
Sbjct: 125 QYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTPNNIDVVRSLRSALGRRIALGAPLV 184

Query: 185 KLLKESEQELAELENIPGTKAELILDLKAQIEELKRKIAKVPFIDTFDLRFNNFSRREVP 244
             L E E++L  ++  P  + E I  L+ +I  L+ +I ++PFID FDLR+ N  ++  P
Sbjct: 185 NQLHEMERQLEVMKADPDDRREEIKLLEEEIHHLRGRIWRIPFIDPFDLRYVNRVKQPTP 244

Query: 245 SSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLTRTYKNLEVVYIRHHTQAKEVDEHE 304
           SSQAVMFCLMDVSGSMD+  KD+AKRF+ILLYLFL R Y+ +EVV+IRHHT+A+EVDE  
Sbjct: 245 SSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEVDEDT 304

Query: 305 FFYSQETGGTIVSSALKLMHEIQQARYPADEWNIYAAQASDGDNWADDSPTCKQLLEQKI 364
           FF+S E+GGT+VSSAL+LM ++   RY   EWNIY AQASDGDNW DDSP C+++L   I
Sbjct: 305 FFHSTESGGTVVSSALELMQKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILSDDI 364

Query: 365 LPLVRYFSYIEITNRAHQTLWREYESLQQHYDNIAVQHIRQAEDIYPVFRELFKKQA 421
           L  VRYF+YI++T    Q LW EY  L     ++A++ +  A DIYPVFRELF+KQA
Sbjct: 365 LEKVRYFAYIQVTPE-EQNLWLEYAQLALSQPHMAMKKVETAADIYPVFRELFEKQA 420